COG0327


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0327, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Putative GTP cyclohydrolase 1 type 2, NIF3 family
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG0327 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1527 FBDBKF_09860 69223 69966 -1 nIF3 type 2 GTP cyclohydrolase I Morganella morganii S1
1 group_1527 EHELCC_04660 261188 261931 -1 nIF3 type 2 GTP cyclohydrolase I Morganella morganii S2
2 group_1527 NLDBIP_04660 260984 261727 -1 nIF3 type 2 GTP cyclohydrolase I Morganella morganii S4
3 group_1527 LHKJJB_13970 73651 74394 1 nIF3 type 2 GTP cyclohydrolase I Morganella morganii S3
4 group_1527 HKOGLL_12565 70004 70747 -1 nIF3 type 2 GTP cyclohydrolase I Morganella morganii S5
5 group_1527 F4V73_RS00485 102355 103098 1 type 2 GTP cyclohydrolase I Morganella psychrotolerans
6 group_1527 PMI_RS02735 594319 595062 1 type 2 GTP cyclohydrolase I Proteus mirabilis HI4320