Homologs in group_3656

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3 homologs were identified in 3 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12440 FBDBKF_12440 94.9 Morganella morganii S1 - HD family hydrolase
NLDBIP_19170 NLDBIP_19170 100.0 Morganella morganii S4 - HD family hydrolase
LHKJJB_19060 LHKJJB_19060 100.0 Morganella morganii S3 - HD family hydrolase

Distribution of the homologs in the orthogroup group_3656

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3656

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76514 1.09e-65 201 56 0 172 4 yfdR Uncharacterized protein YfdR Escherichia coli (strain K12)
P42506 3.94e-14 70 34 3 121 4 RCAP_rcc00048 Uncharacterized protein RCAP_rcc00048 Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_19200
Feature type CDS
Gene -
Product HD family hydrolase
Location 10992 - 11519 (strand: 1)
Length 528 (nucleotides) / 175 (amino acids)

Contig

Accession ZDB_242
Length 16493 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3656
Orthogroup size 4
N. genomes 4

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1896 Nucleotide transport and metabolism (F)
General function prediction only (R)		 FR 5'-deoxynucleotidase YfbR and related HD superfamily hydrolases

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06952 5'-nucleotidase [EC:3.1.3.89] Purine metabolism
Pyrimidine metabolism
Metabolic pathways
Nucleotide metabolism		 -

Protein Sequence

MSYIATSTGKHIDFVNITPAQICIEDIARGLSNECRFAGQLESFYSVAQHSVYVSQIVPPEYALEALLHDAAEAYIKDIPSPLKAMLPDYKVVEKRIEAVIREKFGLPPIMTVDVHYADLVMLATEKRDFEIDPDSHWPMLDSAPPHDDIIIQPLTPPQAYHQFMARFEALTLGA

Flanking regions ( +/- flanking 50bp)

ACTTATAAAAAGTAACGGCTTTTTATTATCTAAATTGTGTGGAGAGATAAATGTCATATATAGCAACCAGTACCGGAAAACATATTGATTTCGTCAATATCACTCCGGCTCAGATTTGTATCGAAGATATCGCGCGCGGCCTGTCGAATGAATGCCGGTTTGCCGGGCAACTGGAGAGTTTCTATTCCGTGGCTCAGCACTCTGTATATGTCAGCCAGATTGTACCGCCGGAATATGCACTGGAAGCCCTGCTGCACGATGCTGCTGAGGCGTATATCAAAGACATCCCCTCACCGCTGAAAGCCATGCTGCCGGACTACAAGGTCGTGGAAAAACGTATTGAAGCGGTTATCCGTGAAAAGTTCGGCCTGCCACCGATAATGACAGTTGATGTTCACTATGCCGATCTGGTCATGCTGGCGACCGAAAAGCGGGACTTTGAAATAGACCCCGACAGCCACTGGCCGATGCTGGATTCAGCACCACCACATGATGACATCATTATCCAGCCACTGACACCACCGCAGGCATATCACCAGTTTATGGCGCGGTTTGAAGCTCTCACACTCGGAGCATAAAGATGAAAACTGAATACATTTATATCTGTGCTCAGGCGTACTGCAATGAC