Homologs in group_3004

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17605 FBDBKF_17605 100.0 Morganella morganii S1 alsT Na+/alanine symporter
NLDBIP_18060 NLDBIP_18060 100.0 Morganella morganii S4 alsT Na+/alanine symporter
LHKJJB_18255 LHKJJB_18255 100.0 Morganella morganii S3 alsT Na+/alanine symporter
HKOGLL_17945 HKOGLL_17945 100.0 Morganella morganii S5 alsT Na+/alanine symporter
F4V73_RS14985 F4V73_RS14985 95.4 Morganella psychrotolerans - amino acid carrier protein

Distribution of the homologs in the orthogroup group_3004

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3004

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O34708 8.28e-68 227 35 7 412 3 yflA Uncharacterized transporter YflA Bacillus subtilis (strain 168)
P44917 4.56e-64 217 33 12 462 3 HI_0883 Uncharacterized transporter HI_0883 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q6LX42 1.07e-58 203 32 13 471 1 agcS Sodium/alanine symporter AgcS Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
P30144 6.43e-52 187 37 7 321 1 dagA Na(+)-linked D-alanine glycine permease Pseudoalteromonas haloplanktis
P30144 3.97e-05 49 27 2 120 1 dagA Na(+)-linked D-alanine glycine permease Pseudoalteromonas haloplanktis
O31464 8.48e-51 182 32 13 478 3 glnT Probable sodium/glutamine symporter GlnT Bacillus subtilis (strain 168)
P44555 6.46e-50 180 32 7 406 3 HI_0183 Uncharacterized transporter HI_0183 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O32060 2.43e-48 176 31 10 440 3 yrbD Putative sodium/proton-dependent alanine carrier protein YrbD Bacillus subtilis (strain 168)
Q45068 1.14e-45 168 29 13 483 2 alsT Amino-acid carrier protein AlsT Bacillus subtilis (strain 168)
P30143 6.19e-42 158 28 10 453 3 yaaJ Uncharacterized transporter YaaJ Escherichia coli (strain K12)
P30145 1.24e-38 149 30 10 415 1 acp Sodium/proton-dependent alanine carrier protein Bacillus sp. (strain PS3)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_18090
Feature type CDS
Gene alsT
Product Na+/alanine symporter
Location 16220 - 17656 (strand: 1)
Length 1437 (nucleotides) / 478 (amino acids)

Contig

Accession ZDB_235
Length 38736 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3004
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01235 Sodium:alanine symporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1115 Amino acid transport and metabolism (E) E Na+/alanine symporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03310 alanine or glycine:cation symporter, AGCS family - -

Protein Sequence

MDTILNIINQFSDFIWTYPMPVLLVSLGIWLTIKFRFKYQLNFRFNIKNTYGGLFKKKNAGEQIQGAGSVSSFAAACTALANTVGIGSIGGVATAITMGGPGAIFWLWFSAFFGIATKACEIILGQRYRVKYEKSMDEYVCDRSFVMEHALGWKKGAVALSVCCFMLGPWTCLVQSESATSSIEEAFNVDSYLTLLVMVIFIASVIIGGLKGISSKMESVVPKLAITYLTVAVILLVMNYDQILPAFALIFKSAFSPAAGVGGFAGATVMEAIRFGIARGIYSNDAGTGYGIVAHAAATTDHPIRQSSWGFGEVFLTIIICTVTALAILTTNVWVDYAGITSSRLTTLAFKVTYGDAGSWFMAIFITLLACTTTIGMYFTCEKAVNFFFGDTRANKIAKNLYRVYYLAPIVLFTNLQADILWALTDILSAVYVLITMTLILSRRKEIFRLFNDFWDRYIPAKNAGQDVPPVTYCKRIE

Flanking regions ( +/- flanking 50bp)

GCTGATATTACTCAGGCACTTGATGTGTTTAATTAAACCGGATACTCACTATGGACACGATTCTTAATATTATTAATCAGTTTTCAGATTTTATCTGGACTTATCCGATGCCGGTTTTATTAGTCAGTCTTGGTATCTGGCTGACCATTAAATTCCGGTTTAAATACCAGCTGAATTTCCGTTTTAATATTAAAAATACCTACGGCGGGTTGTTTAAGAAAAAAAATGCCGGTGAACAAATTCAGGGGGCGGGCTCAGTATCCAGTTTTGCCGCCGCCTGTACCGCGCTGGCGAATACCGTGGGTATCGGCAGTATCGGCGGGGTGGCAACCGCGATTACGATGGGCGGGCCGGGCGCGATATTCTGGCTCTGGTTTTCTGCTTTTTTCGGAATTGCGACCAAAGCCTGTGAAATTATTCTCGGCCAGCGTTACCGCGTCAAATATGAAAAATCGATGGATGAGTATGTCTGTGACCGCTCATTTGTGATGGAACATGCACTGGGCTGGAAAAAAGGTGCGGTTGCATTGTCGGTATGCTGTTTTATGCTCGGGCCGTGGACTTGTCTGGTACAGAGTGAATCCGCGACGTCCTCTATCGAAGAAGCGTTTAATGTCGACAGTTACCTGACATTGCTGGTGATGGTTATTTTTATTGCCAGTGTCATTATCGGCGGATTAAAAGGTATTTCCTCCAAAATGGAAAGTGTGGTGCCGAAACTGGCGATCACCTATCTGACCGTTGCCGTTATTCTGCTGGTGATGAATTATGATCAGATCCTGCCTGCATTTGCGCTGATTTTTAAATCGGCCTTTTCACCGGCTGCCGGTGTCGGCGGATTTGCCGGAGCAACTGTGATGGAAGCCATCCGTTTCGGGATCGCCAGGGGGATTTATTCCAATGACGCCGGAACCGGCTACGGTATTGTGGCACATGCGGCAGCAACAACCGATCACCCGATCCGCCAGTCCAGCTGGGGTTTCGGCGAGGTTTTCCTGACCATTATTATCTGTACTGTTACCGCACTGGCTATTCTGACCACTAACGTGTGGGTGGATTACGCCGGCATTACCTCATCACGCCTGACCACGCTGGCATTTAAAGTGACATACGGTGATGCGGGCAGCTGGTTTATGGCGATATTTATCACCCTGCTGGCCTGTACCACGACCATCGGCATGTATTTTACCTGTGAGAAAGCGGTGAACTTTTTCTTCGGGGATACCAGAGCCAATAAAATCGCGAAGAATTTGTACCGGGTTTATTACCTGGCGCCGATTGTGTTATTCACTAACCTTCAGGCCGATATTTTGTGGGCGCTGACCGATATTCTGAGTGCGGTCTATGTGCTGATCACCATGACATTAATACTGAGCCGGCGGAAAGAGATTTTCCGGTTATTTAATGATTTCTGGGATCGCTATATTCCGGCGAAAAATGCCGGACAGGATGTGCCGCCGGTGACTTACTGTAAGCGGATAGAATAAAAAAATCAGGCCGGTATTCACCGGCCTTTCTTACATTATCTTCCCAGATA