Homologs in group_403

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16285 FBDBKF_16285 100.0 Morganella morganii S1 rfaQ putative lipopolysaccharide heptosyltransferase III
NLDBIP_17020 NLDBIP_17020 100.0 Morganella morganii S4 rfaQ putative lipopolysaccharide heptosyltransferase III
LHKJJB_16940 LHKJJB_16940 100.0 Morganella morganii S3 rfaQ putative lipopolysaccharide heptosyltransferase III
HKOGLL_16900 HKOGLL_16900 100.0 Morganella morganii S5 rfaQ putative lipopolysaccharide heptosyltransferase III
F4V73_RS17305 F4V73_RS17305 84.9 Morganella psychrotolerans rfaQ putative lipopolysaccharide heptosyltransferase III
PMI_RS15625 PMI_RS15625 27.2 Proteus mirabilis HI4320 - glycosyltransferase family 9 protein
PMI_RS15665 PMI_RS15665 58.4 Proteus mirabilis HI4320 rfaQ putative lipopolysaccharide heptosyltransferase III

Distribution of the homologs in the orthogroup group_403

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_403

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9R9D5 1.73e-93 285 43 4 342 1 waaQ Lipopolysaccharide heptosyltransferase 3 Escherichia coli
P25742 1.52e-86 268 43 6 344 1 waaQ Lipopolysaccharide heptosyltransferase 3 Escherichia coli (strain K12)
P37692 1.11e-19 92 28 8 325 1 waaF Lipopolysaccharide heptosyltransferase 2 Escherichia coli (strain K12)
P37421 2.42e-19 91 28 8 325 3 waaF Lipopolysaccharide heptosyltransferase 2 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57336 6.38e-15 78 21 6 295 3 opsX Lipopolysaccharide core heptosyltransferase OpsX Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9HUF5 6.01e-13 72 25 9 306 3 waaC Lipopolysaccharide heptosyltransferase 1 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q7VNA4 1.88e-11 68 25 11 331 3 waaF Lipooligosaccharide heptosyltransferase 2 Haemophilus ducreyi (strain 35000HP / ATCC 700724)
P45042 1.51e-10 65 23 12 321 3 waaF Lipooligosaccharide heptosyltransferase 2 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0DX54 5.27e-09 60 24 9 300 1 waaC Lipopolysaccharide heptosyltransferase 1 Escherichia coli O18:K1:H7 (strain RS218 / NMEC)
P24173 9.97e-09 59 24 9 300 1 waaC Lipopolysaccharide heptosyltransferase 1 Escherichia coli (strain K12)
O87333 1.67e-08 58 23 10 303 3 waaC Lipopolysaccharide heptosyltransferase 1 Campylobacter coli
P26469 2.22e-07 55 24 10 302 3 waaC Lipopolysaccharide heptosyltransferase 1 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q0P9A8 1.7e-06 52 25 3 152 3 waaF Lipooligosaccharide heptosyltransferase 2 Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
P0DX62 9.31e-06 50 29 3 107 3 waaF Lipooligosaccharide heptosyltransferase 2 Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828)
P44011 0.000547 45 18 5 298 3 HI_0523 Putative glycosyltransferase HI_0523 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_16320
Feature type CDS
Gene rfaQ
Product putative lipopolysaccharide heptosyltransferase III
Location 44461 - 45534 (strand: 1)
Length 1074 (nucleotides) / 357 (amino acids)

Contig

Accession ZDB_228
Length 65335 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_403
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF01075 Glycosyltransferase family 9 (heptosyltransferase)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0859 Cell wall/membrane/envelope biogenesis (M) M ADP-heptose:LPS heptosyltransferase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02849 lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] Lipopolysaccharide biosynthesis
Metabolic pathways		 -

Protein Sequence

MQTASAPVQRILVIKLRHHGDMLLITPVINTLKANYPDAEVDVLLYQETAPMLSRHPSISHIFAMDRAWRKEGTCKRIGHEWHLLKSLRRRRYDLVVNLADQWYSAIVTRFTGARIRIGLDLRKRQSIFWKKCYTLLADTSQELTMHTVEQNLNGLTPLNLPVTDNHVTMACSEEDRQKTEQLLQRKQVTGDYIVVQPTSRWFYKCWDDDKMSEVIRTLADDGHQIVLSSGPDPREKAMIESILAPCQQAVADGKIVSVAGELTLPQLAALIDRAKLFIGVDSVPMHMAAALQTPMVALFGPTKLVFWSPWQATGEIIKASDYGEQPDPDDVDTRTDERYLSPIPADAVITAARRYL

Flanking regions ( +/- flanking 50bp)

GATTGATACACCTTATTCCCTGATTTCTGTCTGACCCAAATGGAACTCTTATGCAAACAGCATCAGCGCCGGTACAGCGTATTTTAGTAATAAAACTCCGTCATCACGGCGATATGCTGCTGATAACGCCGGTGATTAATACTCTGAAAGCGAATTACCCGGATGCTGAGGTTGATGTCCTGCTGTATCAGGAAACAGCACCGATGCTCAGCCGCCATCCCAGCATCAGCCATATTTTTGCCATGGACAGAGCCTGGCGTAAAGAGGGAACCTGCAAACGTATCGGGCATGAGTGGCATTTACTGAAATCACTGCGCCGCCGCCGTTATGACCTCGTGGTGAATCTGGCTGATCAGTGGTACAGCGCGATTGTGACCCGTTTCACCGGTGCCCGTATCCGTATCGGGCTGGATCTGCGGAAACGGCAGAGTATTTTCTGGAAAAAATGTTACACCCTGCTGGCAGATACCTCACAGGAACTGACCATGCATACGGTGGAGCAGAATCTTAACGGATTAACCCCGCTGAATCTGCCGGTGACTGATAACCATGTCACCATGGCCTGTTCAGAGGAAGACCGGCAGAAGACTGAACAGCTTTTGCAGCGCAAACAGGTGACCGGTGACTATATTGTGGTACAGCCGACATCCCGCTGGTTCTATAAATGCTGGGATGACGACAAGATGAGTGAGGTTATCCGCACACTGGCGGATGACGGGCACCAGATTGTGCTCAGCAGCGGGCCGGATCCGCGCGAAAAAGCGATGATTGAATCTATTCTTGCGCCCTGTCAGCAGGCTGTTGCCGACGGAAAAATTGTGTCCGTTGCCGGAGAACTGACGTTGCCGCAGCTCGCGGCACTGATTGATCGTGCAAAACTGTTTATCGGTGTGGATTCTGTGCCGATGCACATGGCTGCCGCCCTGCAAACGCCGATGGTGGCTCTGTTCGGCCCGACGAAACTGGTGTTCTGGTCGCCGTGGCAGGCAACCGGTGAAATTATTAAAGCATCGGATTACGGGGAACAGCCGGACCCGGATGACGTGGACACAAGGACGGACGAACGTTACCTGAGTCCGATTCCGGCAGACGCAGTGATTACCGCGGCACGGAGATATTTATGAAAAATATGCGTCTGGCGATTGTTCGTCAGAAATACCGCCCGGACGGCGGC