Homologs in group_1439

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09075 FBDBKF_09075 100.0 Morganella morganii S1 afuA ABC-type Fe3+ transport system, periplasmic component
NLDBIP_10680 NLDBIP_10680 100.0 Morganella morganii S4 afuA ABC-type Fe3+ transport system, periplasmic component
LHKJJB_10675 LHKJJB_10675 100.0 Morganella morganii S3 afuA ABC-type Fe3+ transport system, periplasmic component
HKOGLL_13735 HKOGLL_13735 100.0 Morganella morganii S5 afuA ABC-type Fe3+ transport system, periplasmic component
F4V73_RS10870 F4V73_RS10870 88.3 Morganella psychrotolerans - ABC transporter substrate-binding protein
PMI_RS11910 PMI_RS11910 31.5 Proteus mirabilis HI4320 - ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_1439

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1439

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A233 3.27e-164 469 59 2 399 1 pgtC Phosphoglycerate transport regulatory protein PgtC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A234 3.27e-164 469 59 2 399 3 pgtC Phosphoglycerate transport regulatory protein PgtC Salmonella typhi

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_10335
Feature type CDS
Gene afuA
Product ABC-type Fe3+ transport system, periplasmic component
Location 112845 - 114101 (strand: 1)
Length 1257 (nucleotides) / 418 (amino acids)

Contig

Accession ZDB_219
Length 213167 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1439
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13343 Bacterial extracellular solute-binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1840 Inorganic ion transport and metabolism (P) P ABC-type Fe3+ transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08478 phosphoglycerate transport regulatory protein PgtC Two-component system -

Protein Sequence

MPQRRIRRFAASMITAAALMFSLSATAKPDELVIATTFSPEATAHIISSWQQQPGAVRIRTINRTSAALERLLDTPALEDVDLVVTSSPMLLQHLQEHDRLAELTDLPEVSRRLVPLRLRDNAAAVAFSGYGILVNKRRMAENNLPVPASWDSLTDSRYQGLLLMSSPSRSDTYHLMVESLLQQRGWDEGWALLLNVSGNLATISSRSFGVADKIKAGLGGAAPVIDNYAWLLLGDPELAFNYLPDSATSPTFVAISRHSLNKDKARAFIRFLLSEQGQNVLADSSTGKYPVTPLPQGNPREPVQRRLLNSPHQMDENLVLKRQRMVQQLFDTAITFRLTESIDAWRALYTAEARVKRPLPHIRALLTAMPVSAQESADPAYYSRFDDNRKAEEEYIRWQQFFREQQRKAIAELEKVR

Flanking regions ( +/- flanking 50bp)

CATTTTTATGATGTGAATCACACCCCGCAAACGAATACAGAACCCAGCTTATGCCACAACGCCGAATCCGCCGCTTTGCGGCCAGTATGATAACCGCCGCCGCACTGATGTTCAGTCTGTCAGCCACGGCGAAACCGGATGAACTGGTGATCGCCACCACGTTTTCACCGGAAGCAACAGCCCATATTATCAGCAGCTGGCAGCAGCAGCCCGGTGCTGTCCGTATCCGTACCATTAACCGCACCAGTGCGGCACTGGAGCGTCTGCTGGATACCCCGGCACTGGAAGATGTTGATCTGGTGGTGACATCCTCGCCGATGTTATTACAACATCTGCAGGAGCATGACCGGCTGGCGGAACTCACGGATCTGCCGGAGGTCTCCCGGCGTCTGGTACCGCTGCGGCTGCGCGATAATGCGGCAGCGGTGGCGTTTTCCGGTTACGGCATTCTGGTGAATAAACGGCGGATGGCGGAAAATAATCTGCCGGTTCCGGCATCGTGGGATTCCCTGACCGACAGCCGCTATCAGGGGTTGCTGCTGATGAGCAGCCCGTCACGCTCGGATACCTATCATCTGATGGTCGAATCGCTGTTACAGCAGCGCGGCTGGGATGAGGGCTGGGCATTGCTGCTCAATGTTTCCGGGAATCTGGCGACTATCTCATCACGCAGTTTCGGTGTGGCGGACAAAATCAAAGCAGGGCTGGGCGGTGCCGCGCCGGTGATTGATAACTACGCCTGGCTGCTGCTGGGCGATCCGGAGCTGGCCTTTAATTATCTGCCGGATTCCGCAACATCCCCGACCTTCGTCGCGATAAGCCGTCACAGTCTGAATAAAGACAAGGCCCGCGCCTTTATCCGTTTTTTGCTCAGTGAACAGGGGCAGAACGTGCTGGCGGACAGCAGCACCGGTAAATATCCTGTCACACCGCTGCCGCAGGGAAATCCGCGTGAGCCGGTGCAGCGCCGCCTGCTGAATTCCCCGCATCAGATGGATGAGAATCTGGTGCTCAAACGCCAGCGTATGGTACAGCAGCTGTTTGATACCGCGATCACCTTCCGTCTGACGGAATCCATCGACGCCTGGCGTGCCCTGTATACCGCCGAAGCCCGCGTGAAACGCCCGCTGCCGCATATCCGTGCTCTGCTGACCGCCATGCCGGTCTCTGCACAGGAGAGTGCCGACCCGGCCTATTACTCACGTTTTGACGATAACCGCAAAGCGGAGGAAGAGTATATCCGCTGGCAGCAGTTCTTCCGCGAGCAACAGCGCAAAGCGATTGCGGAACTGGAGAAAGTCCGGTGAAACAGCGTATTGCCCGTTATATCGGCCGTTTCAGTATCAGTGCGATCCTG