Homologs in group_1495

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09075 FBDBKF_09075 88.3 Morganella morganii S1 afuA ABC-type Fe3+ transport system, periplasmic component
EHELCC_10335 EHELCC_10335 88.3 Morganella morganii S2 afuA ABC-type Fe3+ transport system, periplasmic component
NLDBIP_10680 NLDBIP_10680 88.3 Morganella morganii S4 afuA ABC-type Fe3+ transport system, periplasmic component
LHKJJB_10675 LHKJJB_10675 88.3 Morganella morganii S3 afuA ABC-type Fe3+ transport system, periplasmic component
HKOGLL_13735 HKOGLL_13735 88.3 Morganella morganii S5 afuA ABC-type Fe3+ transport system, periplasmic component
PMI_RS11910 PMI_RS11910 31.8 Proteus mirabilis HI4320 - ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_1495

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1495

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A233 2.88e-164 470 59 1 388 1 pgtC Phosphoglycerate transport regulatory protein PgtC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A234 2.88e-164 470 59 1 388 3 pgtC Phosphoglycerate transport regulatory protein PgtC Salmonella typhi

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10870
Feature type CDS
Gene -
Product ABC transporter substrate-binding protein
Location 311520 - 312779 (strand: 1)
Length 1260 (nucleotides) / 419 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000002
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1495
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13343 Bacterial extracellular solute-binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1840 Inorganic ion transport and metabolism (P) P ABC-type Fe3+ transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08478 phosphoglycerate transport regulatory protein PgtC Two-component system -

Protein Sequence

MSRIRICRLAASLITVMAALILSLPAAAKQDELVIATTLSPEATAHIISSWQQQPGAVRVRTINRTSAALERLLDTPALENVDLVVTSSPMLLQHLQEHDRLAELPGLPDISLRLVPLRLRDNVAAVAFSGYGVLVNKRRMAENNLPVPASWDALADSRYQGLLLMSSPSRSDTYHLMVESLLQQRGWDEGWRLLLNISGNFATISSRSFGVADKIKAGLGGAAPIIDNYAWLLLSDPELAFNYLPDSATSPTFVAIVSHSLNKENARAFIRFLLSEQGQLVLADSNTGKYPVTPLPADNPREPEQRRLLNSPQPMDENLVLKRQRMVQQLFDTAITFRLTESKDAWRALYTAEARVKRPLPHVRALLTAMPVSAQDSVDPVYYTRFEDNRKAEEEYIRWQRFFQEQQRKAIAELEKVR

Flanking regions ( +/- flanking 50bp)

CATTTTTTTGATGTGAGTCACATCCGGTGAACAAATACAGAAGTCTGCTTATGTCACGAATCCGAATCTGCCGTTTAGCGGCATCTCTTATTACTGTAATGGCTGCGCTGATCCTGAGCTTGCCTGCGGCGGCAAAACAGGATGAACTGGTGATTGCCACCACGCTCTCCCCGGAAGCGACTGCCCATATTATCAGCAGTTGGCAGCAGCAGCCGGGTGCGGTTCGTGTCCGGACAATCAACCGCACCAGTGCGGCACTTGAGCGTCTGCTGGATACACCGGCACTGGAAAATGTCGATCTGGTGGTGACGTCGTCGCCGATGCTGTTACAGCATTTACAGGAGCATGACCGTCTGGCTGAATTACCGGGACTGCCGGATATTTCCCTGAGGCTGGTGCCGTTGCGTCTGAGAGATAATGTGGCGGCGGTGGCATTTTCCGGTTACGGCGTACTGGTTAACAAGCGGCGGATGGCAGAGAACAATCTGCCGGTGCCTGCATCCTGGGATGCGCTGGCAGACAGCCGTTATCAGGGATTACTGCTGATGAGCAGCCCGTCGCGCTCTGATACCTATCATCTGATGGTTGAATCACTGTTGCAGCAGCGGGGCTGGGATGAAGGCTGGCGTCTGCTGCTGAATATCTCGGGTAATTTTGCCACTATTTCCTCACGCAGTTTCGGGGTGGCAGATAAAATAAAAGCCGGACTGGGCGGCGCGGCACCGATTATTGATAACTATGCCTGGTTGTTGCTGAGTGACCCGGAGCTGGCATTTAATTATTTACCGGACTCTGCAACCTCCCCGACGTTTGTGGCAATTGTCAGCCACAGCCTGAATAAAGAGAATGCCCGCGCATTTATCCGCTTCCTGCTCAGTGAGCAGGGGCAGTTAGTTCTGGCGGACAGCAATACCGGAAAATACCCCGTCACACCTCTGCCGGCGGATAATCCCAGAGAGCCGGAGCAGCGCCGTTTGCTGAATTCCCCGCAGCCGATGGATGAAAACCTTGTACTGAAGCGCCAGCGCATGGTGCAGCAACTCTTTGATACCGCGATTACATTCCGCTTAACGGAATCGAAAGATGCCTGGCGTGCGCTTTATACAGCAGAAGCCCGCGTTAAGCGCCCGCTGCCGCATGTCCGCGCATTACTCACCGCAATGCCGGTTTCCGCACAGGACAGTGTGGATCCGGTGTATTACACGCGTTTTGAAGACAACCGGAAAGCAGAAGAAGAATATATCCGCTGGCAGCGGTTTTTTCAGGAGCAGCAGCGTAAAGCCATTGCTGAGCTGGAAAAAGTCCGATGAAACAACGAATTGCTCACTATATCGGTCGTTTCAGTATAAGCGGAATACTG