Homologs in group_701

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03020 FBDBKF_03020 100.0 Morganella morganii S1 yqjE Uncharacterized membrane protein YqjE
NLDBIP_07840 NLDBIP_07840 100.0 Morganella morganii S4 yqjE Uncharacterized membrane protein YqjE
LHKJJB_07375 LHKJJB_07375 100.0 Morganella morganii S3 yqjE Uncharacterized membrane protein YqjE
HKOGLL_03555 HKOGLL_03555 100.0 Morganella morganii S5 yqjE Uncharacterized membrane protein YqjE
F4V73_RS11895 F4V73_RS11895 84.7 Morganella psychrotolerans - phage holin family protein
PMI_RS18400 PMI_RS18400 58.1 Proteus mirabilis HI4320 - phage holin family protein

Distribution of the homologs in the orthogroup group_701

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_701

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64587 9.15e-37 125 57 0 134 3 yqjE Inner membrane protein YqjE Shigella flexneri
P64585 9.15e-37 125 57 0 134 1 yqjE Inner membrane protein YqjE Escherichia coli (strain K12)
P64586 9.15e-37 125 57 0 134 3 yqjE Inner membrane protein YqjE Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_07515
Feature type CDS
Gene yqjE
Product Uncharacterized membrane protein YqjE
Location 239764 - 240177 (strand: -1)
Length 414 (nucleotides) / 137 (amino acids)

Contig

Accession ZDB_216
Length 269970 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_701
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07332 Putative Actinobacterial Holin-X, holin superfamily III

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5393 Function unknown (S) S Uncharacterized membrane protein YqjE

Protein Sequence

MTDQERPQGPGKGLLDTLTRIAAIVISMAETRLRLVATELEEEKSNLIQLILLAGAALLLTAFGLMSLMILVMWAVDPVYRLTAMIIMTSVLLGGALIFALWAVRKARRSSLLGATREQLAIDRQLLERKKQEQDHE

Flanking regions ( +/- flanking 50bp)

GTGCCGCTGTCGGTGTGGTGTTAGGTGTTTTACTGGCCCGCCGCTGAGTTATGACCGATCAGGAGCGTCCGCAGGGGCCCGGCAAAGGGCTCCTTGATACACTGACACGTATCGCCGCCATCGTTATCAGCATGGCAGAAACCCGGCTCAGGCTTGTCGCCACTGAGCTGGAGGAAGAGAAATCCAACCTGATCCAGCTGATTCTGCTGGCCGGTGCCGCTCTGCTGCTGACCGCGTTCGGACTGATGAGCCTGATGATCCTGGTTATGTGGGCCGTTGATCCTGTGTACCGCCTGACCGCGATGATTATCATGACATCCGTCCTGCTCGGCGGGGCACTGATTTTCGCCCTGTGGGCCGTCCGCAAAGCCCGCCGTTCATCTCTGCTGGGTGCGACCCGCGAACAGCTGGCGATCGACAGGCAACTGCTGGAAAGAAAAAAGCAGGAGCAGGATCATGAATAAGCATCTGCGCGCTGAACGTGCCCGCAGAAAGCAGGCGCTGATTGACACTA