COG5393


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG5393, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized membrane protein YqjE
Function(s) descr. Function unknown (S)

Occurence in the database

COG5393 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_701 FBDBKF_03020 6926 7339 1 yqjE Uncharacterized membrane protein YqjE Morganella morganii S1
1 group_701 EHELCC_07515 239764 240177 -1 yqjE Uncharacterized membrane protein YqjE Morganella morganii S2
2 group_701 NLDBIP_07840 239637 240050 -1 yqjE Uncharacterized membrane protein YqjE Morganella morganii S4
3 group_701 LHKJJB_07375 203383 203796 -1 yqjE Uncharacterized membrane protein YqjE Morganella morganii S3
4 group_701 HKOGLL_03555 29591 30004 1 yqjE Uncharacterized membrane protein YqjE Morganella morganii S5
5 group_701 F4V73_RS11895 532310 532723 -1 phage holin family protein Morganella psychrotolerans
6 group_701 PMI_RS18400 4036586 4036996 -1 phage holin family protein Proteus mirabilis HI4320