Homologs in group_812

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03910 FBDBKF_03910 100.0 Morganella morganii S1 - Core-binding (CB) domain-containing protein
NLDBIP_06950 NLDBIP_06950 100.0 Morganella morganii S4 - Core-binding (CB) domain-containing protein
LHKJJB_06485 LHKJJB_06485 100.0 Morganella morganii S3 - Core-binding (CB) domain-containing protein
HKOGLL_04445 HKOGLL_04445 100.0 Morganella morganii S5 - Core-binding (CB) domain-containing protein
F4V73_RS10125 F4V73_RS10125 52.4 Morganella psychrotolerans - integrase domain-containing protein
PMI_RS12670 PMI_RS12670 99.7 Proteus mirabilis HI4320 - integrase domain-containing protein

Distribution of the homologs in the orthogroup group_812

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_812

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_06625
Feature type CDS
Gene -
Product Core-binding (CB) domain-containing protein
Location 65233 - 66141 (strand: 1)
Length 909 (nucleotides) / 302 (amino acids)

Contig

Accession ZDB_216
Length 269970 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_812
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12834 Phage integrase, N-terminal
PF12835 Integrase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4974 Replication, recombination and repair (L) L Site-specific recombinase XerD

Protein Sequence

MSRRAKALSREMHILARQAGGSFKTIADRVKIAERVAAELAGLNIQIRSVEQLKSRYIEMYIHARREQNISLRSCQNEMSAIRAIFRVAGRHKLADPKHERLSNEALGLSGASRAGTRTAISDERFHEALARIEPYDQGVALTMQLSRSLGLRNEEAVQSVKSLRTWQQALKNGKDRVHVVFGTKGGRPREALVPDKARVLTLINKAIEYADKHNGYLINRPSLHSAKDRYINVMRRIGGFIHEESNHGLRYAYAQDVEKYYLSQGFSQKEAYALTSMDLGHGDGRGDYIKRVYSQKGDIEE

Flanking regions ( +/- flanking 50bp)

CGCCGGGAAAAGGTAACCAGTTGAGAGCGAAAGAGGCGGAGAATCAGAGAATGTCCAGAAGAGCAAAAGCCCTGTCCCGTGAAATGCATATCCTTGCACGTCAGGCCGGAGGGAGCTTTAAAACCATTGCAGACCGGGTCAAAATTGCAGAACGGGTTGCGGCAGAGCTGGCCGGGTTGAATATTCAGATACGATCTGTTGAGCAACTGAAATCCCGCTATATTGAAATGTATATCCATGCCCGCAGAGAACAGAATATCAGTTTACGCAGCTGTCAAAACGAAATGTCGGCTATCCGGGCGATATTTCGTGTTGCCGGACGTCATAAACTGGCTGACCCTAAACATGAGCGCCTCAGTAATGAGGCGCTGGGGCTTTCAGGTGCCAGCAGGGCTGGCACCCGTACCGCGATATCGGACGAGCGCTTTCACGAAGCGCTCGCTCGGATTGAGCCTTATGATCAGGGGGTGGCATTAACTATGCAGTTATCCCGTAGTCTGGGATTGAGAAATGAAGAAGCCGTGCAGTCAGTAAAATCATTACGGACCTGGCAACAGGCGCTTAAAAACGGTAAAGATCGCGTTCATGTGGTTTTTGGGACAAAAGGAGGCAGACCCCGTGAAGCATTAGTGCCGGATAAAGCCCGTGTATTAACATTAATTAATAAAGCCATTGAATATGCGGATAAACATAACGGTTATTTAATTAATCGTCCGTCATTACATTCTGCCAAAGATCGTTATATTAATGTGATGCGACGGATAGGCGGATTTATTCACGAAGAATCAAATCATGGTTTACGGTATGCCTATGCTCAGGATGTTGAAAAATATTATCTCAGTCAGGGATTCAGTCAAAAGGAAGCCTATGCATTAACCTCCATGGATTTAGGGCATGGTGACGGTCGTGGCGATTATATTAAACGGGTTTATAGTCAGAAAGGAGATATTGAGGAATAAGATAAAAATGAAAGTCTGTTTAATTATTTTGTTTATTAATTTTGCTTTTT