Homologs in group_868

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04405 FBDBKF_04405 100.0 Morganella morganii S1 leuO transcriptional regulator LeuO
NLDBIP_06015 NLDBIP_06015 100.0 Morganella morganii S4 leuO transcriptional regulator LeuO
LHKJJB_02895 LHKJJB_02895 100.0 Morganella morganii S3 leuO transcriptional regulator LeuO
HKOGLL_06370 HKOGLL_06370 100.0 Morganella morganii S5 leuO transcriptional regulator LeuO
F4V73_RS08850 F4V73_RS08850 89.2 Morganella psychrotolerans leuO transcriptional regulator LeuO
PMI_RS10260 PMI_RS10260 64.0 Proteus mirabilis HI4320 leuO transcriptional regulator LeuO

Distribution of the homologs in the orthogroup group_868

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_868

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P46924 8.51e-124 360 59 0 294 3 leuO Probable HTH-type transcriptional regulator LeuO Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P10151 2.61e-120 351 56 1 307 1 leuO HTH-type transcriptional regulator LeuO Escherichia coli (strain K12)
P23720 3.37e-29 116 26 5 299 3 nodD3 Nodulation protein D 3 Rhizobium leguminosarum bv. phaseoli
Q9EXL7 6.25e-27 110 25 5 299 3 nagR HTH-type transcriptional activator NagR Ralstonia sp.
Q08812 6.41e-26 108 26 4 273 3 syrM HTH-type transcriptional regulator SyrM Rhizobium etli
P55619 7.71e-26 108 28 5 308 1 syrM1 HTH-type transcriptional regulator SyrM 1 Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q02876 8.25e-26 107 28 8 306 3 nodD1 Nodulation protein D 1 Rhizobium tropici
P04680 8.34e-26 107 26 6 303 3 nodD Nodulation protein D Rhizobium leguminosarum bv. trifolii
P50327 1.35e-25 107 27 6 305 3 nodD1 Nodulation protein D 1 Bradyrhizobium sp. (strain NC92)
P55700 1.75e-25 106 26 7 309 1 nodD2 Nodulation protein D 2 Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q45264 2.16e-25 106 26 6 305 3 nodD1 Nodulation protein D 1 Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
P04681 4.75e-25 105 27 6 300 3 nodD Nodulation protein D Rhizobium leguminosarum bv. viciae
P12233 6.88e-25 105 26 7 309 3 nodD2 Nodulation protein D 2 Bradyrhizobium japonicum
P50324 1.69e-24 104 27 5 302 3 nodD2 Nodulation protein D 2 Bradyrhizobium elkanii
P23718 1.99e-24 103 27 7 306 3 nodD1 Nodulation protein D 1 Rhizobium leguminosarum bv. phaseoli
P30979 2.05e-24 103 27 4 265 3 ybeF Uncharacterized HTH-type transcriptional regulator YbeF Escherichia coli (strain K12)
P50328 2.15e-24 104 26 5 290 3 nodD2 Nodulation protein D 2 Bradyrhizobium sp. (strain NC92)
P10183 3.58e-24 102 27 5 296 3 nahR HTH-type transcriptional activator NahR Pseudomonas putida
P55733 1.18e-23 102 25 5 303 3 syrM2 HTH-type transcriptional regulator SyrM 2 Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P50323 9.34e-23 99 26 6 305 3 nodD1 Nodulation protein D 1 Bradyrhizobium elkanii
P23719 1.58e-22 99 26 7 309 3 nodD2 Nodulation protein D 2 Rhizobium leguminosarum bv. phaseoli
P08719 2.15e-22 98 25 6 303 3 nodD2 Nodulation protein D 2 Rhizobium meliloti (strain 1021)
Q45263 2.81e-22 98 26 8 305 3 nodD2 Nodulation protein D 2 Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
P04682 2.22e-21 95 26 6 305 3 nodD Nodulation protein D Bradyrhizobium sp. (strain ANU 289)
P03031 2.92e-21 95 25 6 303 3 nodD1 Nodulation protein D 1 Rhizobium meliloti (strain 1021)
P55359 6.63e-21 94 23 5 298 3 nodD1 Nodulation protein D 1 Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P23190 1.56e-20 93 25 5 299 3 nodD3 Nodulation protein D 3 Rhizobium meliloti (strain 1021)
P12232 1.94e-20 93 23 5 298 3 nodD1 Nodulation protein D 1 Bradyrhizobium japonicum
P32008 3.54e-20 92 27 6 291 3 nodD2 Nodulation protein D 2 Rhizobium tropici
P16556 7.09e-20 91 26 7 301 3 nodD Nodulation protein D Rhizobium leguminosarum
P50331 7.98e-20 91 23 6 301 3 nodD1 Nodulation protein D 1 Neorhizobium galegae
Q52838 2.83e-18 87 25 5 289 3 nodD1 Nodulation protein D 1 Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
P18561 2.39e-17 84 23 6 313 3 syrM HTH-type transcriptional regulator SyrM Rhizobium meliloti (strain 1021)
Q52779 3.31e-17 83 24 5 292 3 nodD3 Nodulation protein D 3 Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
P52698 4.26e-17 84 27 2 198 3 phcA HTH-type transcriptional regulator PhcA Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
P77746 2.94e-16 80 25 5 268 2 ybdO Uncharacterized HTH-type transcriptional regulator YbdO Escherichia coli (strain K12)
P20669 9.45e-16 79 26 5 282 3 nodD Nodulation protein D Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
P52679 1.15e-12 70 21 6 308 1 pcpR PCP degradation transcriptional activation protein Sphingobium chlorophenolicum
Q9ZN79 2.57e-12 69 21 6 301 3 linR HTH-type transcriptional regulator LinR Sphingobium indicum (strain DSM 16413 / CCM 7287 / MTCC 6362 / UT26 / NBRC 101211 / UT26S)
P27111 2.75e-08 57 23 5 247 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
Q08597 5.82e-08 57 26 4 187 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
P77171 7.67e-08 56 25 2 192 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
Q47005 8.32e-08 56 27 5 182 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
Q88JX7 9.21e-08 56 28 6 189 3 galR HTH-type transcriptional regulator GalR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P52659 1.08e-07 55 26 9 258 3 abaB HTH-type transcriptional regulator AbaB Streptomyces antibioticus
Q8X4M5 1.35e-07 55 23 4 246 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
O06703 2.03e-06 52 26 4 173 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q47141 2.04e-06 52 23 6 255 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
O32255 3.22e-06 51 23 2 170 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
Q9HWH8 5.81e-06 50 22 9 307 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P52658 8.49e-06 50 26 2 170 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
P31463 8.72e-06 50 21 11 300 1 yidZ HTH-type transcriptional regulator YidZ Escherichia coli (strain K12)
B1X9U0 8.72e-06 50 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli (strain K12 / DH10B)
C4ZYY9 8.72e-06 50 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli (strain K12 / MC4100 / BW2952)
A8ACM1 1.32e-05 49 21 9 303 3 yidZ HTH-type transcriptional regulator YidZ Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q8FBU9 1.78e-05 49 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P39127 2.31e-05 48 22 0 169 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
B7NF28 2.34e-05 48 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q3YWK2 2.68e-05 48 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Shigella sonnei (strain Ss046)
Q31UW5 2.68e-05 48 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Shigella boydii serotype 4 (strain Sb227)
B2TUR4 2.68e-05 48 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B6I3U4 2.68e-05 48 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli (strain SE11)
B1IX27 2.68e-05 48 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6H3 2.68e-05 48 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli O9:H4 (strain HS)
B7L852 2.68e-05 48 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli (strain 55989 / EAEC)
A7ZTR6 2.68e-05 48 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli O139:H28 (strain E24377A / ETEC)
P70773 3.19e-05 48 36 1 77 3 argP HTH-type transcriptional regulator ArgP Aeromonas salmonicida
P52676 3.32e-05 48 29 4 157 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
B5YXB5 4.52e-05 48 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XB23 4.52e-05 48 21 11 300 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli O157:H7
P52662 0.000104 47 24 4 206 3 pecT HTH-type transcriptional regulator PecT Dickeya dadantii (strain 3937)
P14145 0.000145 46 37 0 66 3 ampR HTH-type transcriptional activator AmpR Rhodobacter capsulatus
P77744 0.00017 46 22 4 185 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P0A4T7 0.000222 45 26 6 181 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 0.000222 45 26 6 181 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
Q57748 0.000277 45 24 4 175 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q328Z9 0.000279 45 21 13 306 3 yidZ HTH-type transcriptional regulator YidZ Shigella dysenteriae serotype 1 (strain Sd197)
B4TAV5 0.000325 45 21 9 293 3 yidZ HTH-type transcriptional regulator YidZ Salmonella heidelberg (strain SL476)
P0DUU5 0.000339 45 36 0 73 1 aceR HTH-type transcriptional regulator AceR Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
P52665 0.000421 43 39 0 58 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
Q5N5I5 0.000506 45 34 0 76 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 0.000506 45 34 0 76 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P25544 0.000508 44 40 0 66 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
Q9JXW7 0.000597 44 23 7 244 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q5PKV5 0.0006 44 21 9 293 3 yidZ HTH-type transcriptional regulator YidZ Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q6LMN6 0.000694 44 33 1 83 3 argP HTH-type transcriptional regulator ArgP Photobacterium profundum (strain SS9)
P36771 0.000724 44 27 5 158 1 lrhA Probable HTH-type transcriptional regulator LrhA Escherichia coli (strain K12)
Q8VWE6 0.00073 44 27 5 158 3 lrhA Probable HTH-type transcriptional regulator LrhA Escherichia coli O157:H7
P03030 0.000797 44 35 0 71 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
P20667 0.001 43 23 4 189 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_05695
Feature type CDS
Gene leuO
Product transcriptional regulator LeuO
Location 132302 - 133249 (strand: -1)
Length 948 (nucleotides) / 315 (amino acids)

Contig

Accession ZDB_215
Length 284267 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_868
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05798 LysR family transcriptional regulator, transcriptional activator for leuABCD operon - -

Protein Sequence

MTEYTSVADVKKESGETQLRNVDLNLLTVFDAVMQMQNVTRAAELLGMSQPAVSNAVSRLKVMFNDELFVRFGRGIQPTARAKQLFGPVRQALQLVHNELPGAGFEPGSSERTFNLAISSPLDIRLTDKIIEQVKLHSENIDVNIQSYMNSHIENNLKYQETDFAVSYNRFDKPDYSHHLLFNDQLSLVAARNHPRIQYTVTEKQIFTEQHAVVSLDLIDSFSSPYYENNELLRAIVYQGTNLVSVLNIVSKTELVAIAPKWLIQLYSHVLPIQEVQLPWDKVSRPAFLIWHEACTRDKGHQWMKALLTQFTHHM

Flanking regions ( +/- flanking 50bp)

GGCGGCAGGTGGCTTATTGAAGTCATTATAATCATTTATTGGAGTTTAAGATGACTGAATACACCTCAGTGGCAGATGTAAAAAAAGAATCCGGTGAAACACAGCTGCGTAATGTGGATCTTAATCTGCTGACTGTTTTTGATGCGGTTATGCAGATGCAGAATGTGACCCGCGCTGCTGAACTTTTAGGTATGTCGCAACCGGCTGTCAGCAATGCGGTGTCAAGACTTAAAGTTATGTTTAATGATGAATTATTTGTCCGTTTCGGACGGGGAATTCAGCCGACAGCGCGCGCCAAACAGCTGTTCGGGCCGGTCAGGCAGGCATTGCAGCTGGTGCATAATGAGCTGCCGGGTGCCGGTTTTGAACCGGGCAGCAGCGAGCGGACATTTAATCTGGCCATTTCCAGTCCGCTGGATATCCGCCTGACAGACAAAATAATCGAACAGGTTAAACTTCACAGTGAAAATATCGATGTCAATATTCAGTCTTATATGAATTCACATATCGAGAATAACCTGAAATATCAGGAAACTGATTTTGCTGTCAGTTATAATCGTTTCGATAAACCGGATTACAGTCATCACTTATTATTTAATGACCAGTTGTCACTGGTCGCCGCCCGTAACCATCCGCGTATACAATATACGGTAACAGAGAAACAAATATTTACCGAACAGCATGCCGTAGTGTCGCTTGATTTAATTGATTCATTCAGTTCACCGTATTATGAAAATAATGAATTACTCCGGGCTATTGTTTATCAGGGAACCAATTTAGTCAGTGTACTGAATATTGTCTCTAAAACAGAGCTGGTGGCAATTGCACCGAAATGGCTGATTCAGCTCTATTCTCATGTGCTGCCGATTCAGGAAGTGCAACTGCCGTGGGATAAAGTCAGCCGTCCGGCGTTTCTGATCTGGCACGAGGCGTGTACCCGCGATAAAGGGCATCAGTGGATGAAGGCACTGCTGACGCAGTTCACACATCATATGTAATCGATCATTTAATTTATTTCACGCCCCGTCAGGCAAATGTACCTGCCGGG