Homologs in group_868

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04405 FBDBKF_04405 64.0 Morganella morganii S1 leuO transcriptional regulator LeuO
EHELCC_05695 EHELCC_05695 64.0 Morganella morganii S2 leuO transcriptional regulator LeuO
NLDBIP_06015 NLDBIP_06015 64.0 Morganella morganii S4 leuO transcriptional regulator LeuO
LHKJJB_02895 LHKJJB_02895 64.0 Morganella morganii S3 leuO transcriptional regulator LeuO
HKOGLL_06370 HKOGLL_06370 64.0 Morganella morganii S5 leuO transcriptional regulator LeuO
F4V73_RS08850 F4V73_RS08850 64.0 Morganella psychrotolerans leuO transcriptional regulator LeuO

Distribution of the homologs in the orthogroup group_868

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_868

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P46924 1.47e-129 374 60 0 296 3 leuO Probable HTH-type transcriptional regulator LeuO Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P10151 1.45e-127 369 58 1 308 1 leuO HTH-type transcriptional regulator LeuO Escherichia coli (strain K12)
P23720 4.98e-32 124 28 9 304 3 nodD3 Nodulation protein D 3 Rhizobium leguminosarum bv. phaseoli
P10183 1.55e-29 117 26 2 297 3 nahR HTH-type transcriptional activator NahR Pseudomonas putida
P04680 2.11e-28 114 28 7 305 3 nodD Nodulation protein D Rhizobium leguminosarum bv. trifolii
Q02876 4.15e-26 108 27 6 303 3 nodD1 Nodulation protein D 1 Rhizobium tropici
Q45264 7.02e-26 107 26 5 309 3 nodD1 Nodulation protein D 1 Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
Q9EXL7 7.73e-26 107 25 8 310 3 nagR HTH-type transcriptional activator NagR Ralstonia sp.
P23718 1.3e-25 107 27 6 303 3 nodD1 Nodulation protein D 1 Rhizobium leguminosarum bv. phaseoli
P50327 2.39e-25 106 25 5 309 3 nodD1 Nodulation protein D 1 Bradyrhizobium sp. (strain NC92)
P50324 1.02e-24 105 26 7 304 3 nodD2 Nodulation protein D 2 Bradyrhizobium elkanii
P55700 2.48e-24 103 26 6 308 1 nodD2 Nodulation protein D 2 Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P03031 4.59e-24 102 26 6 303 3 nodD1 Nodulation protein D 1 Rhizobium meliloti (strain 1021)
P12233 6.01e-24 102 26 6 308 3 nodD2 Nodulation protein D 2 Bradyrhizobium japonicum
P23190 3.09e-23 100 26 7 315 3 nodD3 Nodulation protein D 3 Rhizobium meliloti (strain 1021)
P55359 6.32e-23 100 24 7 300 3 nodD1 Nodulation protein D 1 Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P50331 7.86e-23 99 25 8 304 3 nodD1 Nodulation protein D 1 Neorhizobium galegae
P04681 9.04e-23 99 26 5 303 3 nodD Nodulation protein D Rhizobium leguminosarum bv. viciae
P23719 1.16e-22 99 26 5 300 3 nodD2 Nodulation protein D 2 Rhizobium leguminosarum bv. phaseoli
P12232 1.6e-22 99 24 7 300 3 nodD1 Nodulation protein D 1 Bradyrhizobium japonicum
P08719 1.99e-22 98 26 6 303 3 nodD2 Nodulation protein D 2 Rhizobium meliloti (strain 1021)
P50323 2.44e-22 98 26 8 315 3 nodD1 Nodulation protein D 1 Bradyrhizobium elkanii
P04682 4.83e-22 97 26 8 315 3 nodD Nodulation protein D Bradyrhizobium sp. (strain ANU 289)
Q45263 5.19e-22 97 26 8 306 3 nodD2 Nodulation protein D 2 Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
P32008 2.09e-20 92 28 5 296 3 nodD2 Nodulation protein D 2 Rhizobium tropici
P55619 2.44e-20 93 26 10 303 1 syrM1 HTH-type transcriptional regulator SyrM 1 Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P50328 3.09e-20 92 26 6 286 3 nodD2 Nodulation protein D 2 Bradyrhizobium sp. (strain NC92)
Q08812 6.74e-20 91 23 4 274 3 syrM HTH-type transcriptional regulator SyrM Rhizobium etli
P55733 3.7e-19 89 23 5 295 3 syrM2 HTH-type transcriptional regulator SyrM 2 Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P16556 3.8e-19 89 24 6 307 3 nodD Nodulation protein D Rhizobium leguminosarum
P30979 6.72e-19 88 25 4 263 3 ybeF Uncharacterized HTH-type transcriptional regulator YbeF Escherichia coli (strain K12)
Q52838 6.84e-18 85 25 6 286 3 nodD1 Nodulation protein D 1 Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
Q52779 1.09e-17 85 26 6 286 3 nodD3 Nodulation protein D 3 Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
P18561 3.83e-17 84 25 5 294 3 syrM HTH-type transcriptional regulator SyrM Rhizobium meliloti (strain 1021)
P52698 7.01e-17 83 24 8 310 3 phcA HTH-type transcriptional regulator PhcA Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
P77746 7.07e-17 82 24 5 299 2 ybdO Uncharacterized HTH-type transcriptional regulator YbdO Escherichia coli (strain K12)
P52679 1.63e-14 76 21 5 300 1 pcpR PCP degradation transcriptional activation protein Sphingobium chlorophenolicum
Q9ZN79 3.38e-14 75 21 5 301 3 linR HTH-type transcriptional regulator LinR Sphingobium indicum (strain DSM 16413 / CCM 7287 / MTCC 6362 / UT26 / NBRC 101211 / UT26S)
P20669 5.05e-14 74 27 7 300 3 nodD Nodulation protein D Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
P27111 2.39e-11 67 23 6 292 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
P37499 3.59e-10 63 23 8 272 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
P52659 9.1e-10 62 22 9 311 3 abaB HTH-type transcriptional regulator AbaB Streptomyces antibioticus
Q8X4M5 1.37e-09 61 22 6 294 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
B4TAV5 2.23e-09 61 20 9 316 3 yidZ HTH-type transcriptional regulator YidZ Salmonella heidelberg (strain SL476)
Q5PKV5 3.44e-09 60 20 9 316 3 yidZ HTH-type transcriptional regulator YidZ Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8Z2P0 6.99e-09 59 20 9 316 3 yidZ HTH-type transcriptional regulator YidZ Salmonella typhi
O06703 1.28e-08 58 25 5 211 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
A8ACM1 1.31e-08 58 21 9 307 3 yidZ HTH-type transcriptional regulator YidZ Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q88JX7 1.37e-08 59 25 4 181 3 galR HTH-type transcriptional regulator GalR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q8FBU9 2.46e-08 58 21 11 307 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
B4TN13 2.65e-08 57 21 9 325 3 yidZ HTH-type transcriptional regulator YidZ Salmonella schwarzengrund (strain CVM19633)
B4SYB4 2.65e-08 57 21 9 325 3 yidZ HTH-type transcriptional regulator YidZ Salmonella newport (strain SL254)
B5QUQ7 2.65e-08 57 21 9 325 3 yidZ HTH-type transcriptional regulator YidZ Salmonella enteritidis PT4 (strain P125109)
B5FN16 2.65e-08 57 21 9 325 3 yidZ HTH-type transcriptional regulator YidZ Salmonella dublin (strain CT_02021853)
B5EYX8 2.65e-08 57 21 9 325 3 yidZ HTH-type transcriptional regulator YidZ Salmonella agona (strain SL483)
Q8ZKY0 2.91e-08 57 21 9 325 3 yidZ HTH-type transcriptional regulator YidZ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O32186 2.98e-08 57 20 5 254 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
Q9HWH8 4.38e-08 57 22 10 305 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q47141 1.36e-07 55 23 7 278 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
Q3YWK2 1.46e-07 55 21 11 307 3 yidZ HTH-type transcriptional regulator YidZ Shigella sonnei (strain Ss046)
Q31UW5 1.46e-07 55 21 11 307 3 yidZ HTH-type transcriptional regulator YidZ Shigella boydii serotype 4 (strain Sb227)
B2TUR4 1.46e-07 55 21 11 307 3 yidZ HTH-type transcriptional regulator YidZ Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B6I3U4 1.46e-07 55 21 11 307 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli (strain SE11)
B1IX27 1.46e-07 55 21 11 307 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6H3 1.46e-07 55 21 11 307 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli O9:H4 (strain HS)
B7L852 1.46e-07 55 21 11 307 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli (strain 55989 / EAEC)
A7ZTR6 1.46e-07 55 21 11 307 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli O139:H28 (strain E24377A / ETEC)
B7NF28 1.47e-07 55 21 11 307 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P52662 2.25e-07 55 26 2 154 3 pecT HTH-type transcriptional regulator PecT Dickeya dadantii (strain 3937)
Q8VWE6 4.86e-07 53 26 1 154 3 lrhA Probable HTH-type transcriptional regulator LrhA Escherichia coli O157:H7
P36771 5.18e-07 53 26 1 154 1 lrhA Probable HTH-type transcriptional regulator LrhA Escherichia coli (strain K12)
Q04778 5.28e-07 53 22 2 243 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
B5YXB5 7.06e-07 53 20 11 308 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XB23 7.06e-07 53 20 11 308 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli O157:H7
Q328Z9 7.95e-07 53 20 11 307 3 yidZ HTH-type transcriptional regulator YidZ Shigella dysenteriae serotype 1 (strain Sd197)
P94501 1.05e-06 52 21 7 263 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
Q08597 2.14e-06 52 22 3 180 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
P52676 2.15e-06 52 30 3 128 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
P31463 2.2e-06 52 20 11 307 1 yidZ HTH-type transcriptional regulator YidZ Escherichia coli (strain K12)
B1X9U0 2.2e-06 52 20 11 307 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli (strain K12 / DH10B)
C4ZYY9 2.2e-06 52 20 11 307 3 yidZ HTH-type transcriptional regulator YidZ Escherichia coli (strain K12 / MC4100 / BW2952)
P44418 2.21e-06 52 21 3 265 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52684 2.51e-06 52 20 3 261 3 mauR Malonate utilization transcriptional regulator Klebsiella pneumoniae
P77171 3.66e-06 51 23 2 187 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P70773 9.39e-06 50 38 3 97 3 argP HTH-type transcriptional regulator ArgP Aeromonas salmonicida
P0A9G1 9.95e-06 50 23 6 252 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 9.95e-06 50 23 6 252 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 9.95e-06 50 23 6 252 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
O32255 1.29e-05 49 19 5 269 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
P0A2Q4 1.33e-05 49 22 8 255 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 1.33e-05 49 22 8 255 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
P0ACQ9 1.73e-05 49 24 5 191 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 1.73e-05 49 24 5 191 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 1.73e-05 49 24 5 191 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
P77744 1.91e-05 49 21 3 192 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P52658 2.5e-05 48 27 5 163 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
A7Z5E4 2.62e-05 48 22 4 183 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
Q47005 4.29e-05 48 24 5 182 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
P52660 4.32e-05 48 26 6 182 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
O35038 4.42e-05 48 24 6 182 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
P0DUU5 6.15e-05 47 25 6 213 1 aceR HTH-type transcriptional regulator AceR Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
P0A4T7 7.14e-05 47 26 6 180 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 7.14e-05 47 26 6 180 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
P20668 8.16e-05 47 20 6 279 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
P52696 8.32e-05 47 22 2 182 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
P14145 8.66e-05 47 37 0 70 3 ampR HTH-type transcriptional activator AmpR Rhodobacter capsulatus
P52691 0.000105 47 22 7 268 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P52661 0.000111 47 20 4 187 1 gbpR HTH-type transcriptional regulator GbpR Azospirillum brasilense
P45105 0.000119 47 25 4 183 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52595 0.000142 46 24 3 185 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
P03030 0.000165 46 28 3 126 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
P39647 0.000307 45 22 2 173 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
P70785 0.000348 45 21 5 251 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P52665 0.000392 43 39 0 58 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
Q5N5I5 0.000556 44 21 3 178 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 0.000556 44 21 3 178 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P25547 0.000731 44 23 5 177 3 gbpR HTH-type transcriptional regulator GbpR Rhizobium radiobacter

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10260
Feature type CDS
Gene leuO
Product transcriptional regulator LeuO
Location 2248569 - 2249513 (strand: -1)
Length 945 (nucleotides) / 314 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_868
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05798 LysR family transcriptional regulator, transcriptional activator for leuABCD operon - -

Protein Sequence

MTDYTSATTTNKESADMHLRNVDLNLLTVFDAVMQMQNVTRAAQVLGMSQPAVSNAVSRLKIMFNDELFVRYGRGIQPTLRAKQLFGPVRQALQLVHNELPGAGFEPEQSDRVFSLSICSPLDIKLAPKIVERIKNKTPNINVNIKSYLNSNIEHQLKYQEVEFFINYKQFDKPEFHSHPLFNDEVVLAVSNQHPRIKESVTEEMLLNEHHSIVSLEDVGSFSAAYYKNTELEDLITYEGTDLNSVLNLVSKTYSVAIAPRWLVESYSEQLNIKAISLPWEKVERPCYLIWHESTARDKGHLWMKNLLSEVCQN

Flanking regions ( +/- flanking 50bp)

TTATTAATAAGTTTTAATTCGCCAATTATAATAACATAGTGGAGTAAAAAATGACGGATTACACATCAGCAACAACGACCAATAAAGAGTCAGCAGATATGCATTTACGTAATGTTGATCTTAATTTATTAACGGTGTTTGATGCTGTTATGCAAATGCAAAATGTCACACGAGCAGCACAGGTGTTAGGTATGTCTCAACCGGCAGTCAGTAATGCAGTTTCTCGTCTTAAGATCATGTTTAATGACGAGTTATTTGTTCGGTATGGCCGAGGTATTCAACCAACATTAAGAGCCAAACAATTATTTGGCCCTGTTCGACAAGCATTACAATTAGTCCATAATGAATTGCCAGGGGCGGGATTTGAACCGGAACAAAGTGATCGTGTGTTTAGCTTATCTATTTGCAGTCCATTAGATATCAAGTTAGCGCCAAAAATTGTAGAGAGAATAAAAAATAAAACCCCTAATATTAATGTAAATATTAAGTCTTATTTGAATAGTAATATTGAACACCAATTAAAATATCAGGAAGTTGAGTTCTTTATTAATTATAAACAATTTGATAAACCAGAGTTTCATTCACACCCTTTATTCAATGATGAAGTGGTTTTGGCTGTCTCTAACCAACACCCACGAATTAAAGAAAGCGTTACTGAAGAGATGTTATTAAATGAGCATCATTCTATTGTTTCTTTAGAAGATGTGGGGTCTTTTAGTGCGGCTTATTATAAGAATACAGAGTTAGAAGATTTAATTACTTATGAAGGTACTGATTTAAATAGTGTATTAAATCTAGTCTCAAAAACTTATTCGGTCGCTATTGCGCCTAGATGGTTAGTTGAAAGCTATTCAGAACAATTGAACATTAAGGCGATATCATTACCTTGGGAGAAGGTAGAACGTCCATGCTATTTAATTTGGCATGAGTCAACGGCGCGAGATAAAGGCCATTTATGGATGAAAAATTTACTTAGTGAGGTTTGTCAAAACTAAGAGTGATTCACTCATAATTAGCACTCTATGCTAATTATGCAGAAATAGTG