Homologs in group_1618

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10170 FBDBKF_10170 100.0 Morganella morganii S1 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX
NLDBIP_04970 NLDBIP_04970 100.0 Morganella morganii S4 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX
LHKJJB_13660 LHKJJB_13660 100.0 Morganella morganii S3 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX
HKOGLL_12875 HKOGLL_12875 100.0 Morganella morganii S5 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX
F4V73_RS00170 F4V73_RS00170 92.5 Morganella psychrotolerans proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX
PMI_RS02020 PMI_RS02020 80.9 Proteus mirabilis HI4320 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX

Distribution of the homologs in the orthogroup group_1618

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1618

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
E0SCY3 3.68e-175 491 68 1 331 1 ousX Glycine betaine-binding periplasmic protein OusX Dickeya dadantii (strain 3937)
P0AFM2 1.4e-173 487 69 1 329 1 proX Glycine betaine/proline betaine-binding periplasmic protein Escherichia coli (strain K12)
P0AFM3 1.4e-173 487 69 1 329 3 proX Glycine betaine/proline betaine-binding periplasmic protein Escherichia coli O157:H7
Q8ZML1 8.33e-168 473 67 2 330 2 proX Glycine betaine/proline betaine-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_04970
Feature type CDS
Gene proX
Product glycine betaine/L-proline ABC transporter substrate-binding protein ProX
Location 317521 - 318519 (strand: 1)
Length 999 (nucleotides) / 332 (amino acids)
In genomic island -

Contig

Accession ZDB_214
Length 335585 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1618
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04069 Substrate binding domain of ABC-type glycine betaine transport system

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2113 Amino acid transport and metabolism (E) E ABC-type proline/glycine betaine transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02002 glycine betaine/proline transport system substrate-binding protein ABC transporters -

Protein Sequence

MRKTAIAAIALSALIGTQAFADTAQPGKGVKVLPVQSTITEETFQTLIVNKALEELGYDVQPIQEVDYNVAYASIANGDATFMAVSWVPLHNSQYKAAGGDDKFYRKGDYVVNAAQGYLIDKKTAEKYHITNIEQLKDPEIAKLFDSNGNGKADLTGCNPGWGCEAAINNHLNAYKLTDTVEHNQGNYAAMMADTITRYKEGKPVLYYTWTPYWISDVLKPGRDVVWLEVPFSSMPDGEKIDTKLPNGKNYGFPPSTMHIAANKAWAEQNPAAAELFAVMKLPVSAINAQNLRMHNGENSQADIERHANAWIKANQAKFDGWIEQARKAADK

Flanking regions ( +/- flanking 50bp)

ATCACCCTGCCGCTGTTATCGCGGCGGCAGGCACAACAAGAGGGAAAACGATGCGTAAGACAGCAATCGCAGCAATCGCCTTATCGGCACTCATTGGTACTCAGGCTTTCGCGGACACCGCGCAGCCGGGCAAAGGGGTCAAAGTGCTGCCTGTACAAAGCACCATTACTGAAGAAACCTTTCAGACCCTTATCGTCAACAAAGCACTGGAAGAACTCGGCTATGACGTGCAGCCGATTCAGGAAGTGGATTACAACGTAGCCTATGCGTCAATCGCCAACGGTGATGCCACCTTTATGGCAGTAAGCTGGGTGCCGCTGCACAATTCCCAGTACAAAGCGGCCGGAGGTGACGATAAATTCTACCGCAAAGGGGATTATGTCGTGAACGCCGCTCAGGGGTATCTGATTGACAAGAAAACCGCTGAGAAATACCACATCACCAATATTGAACAACTGAAAGACCCGGAAATCGCCAAACTGTTTGACAGCAACGGCAACGGTAAAGCGGATCTGACCGGCTGTAACCCTGGCTGGGGCTGTGAGGCCGCCATCAACAACCATCTGAACGCCTATAAGCTGACAGACACCGTTGAGCACAACCAGGGGAACTACGCTGCGATGATGGCAGACACCATCACCCGTTACAAAGAAGGCAAACCGGTGCTTTACTATACCTGGACGCCGTACTGGATCAGTGATGTGCTGAAACCGGGACGCGATGTGGTCTGGCTGGAAGTACCGTTCTCCTCCATGCCGGACGGCGAAAAAATTGACACCAAACTGCCGAACGGCAAAAACTACGGCTTCCCGCCGAGCACCATGCATATCGCAGCCAACAAAGCCTGGGCTGAACAAAACCCGGCAGCCGCAGAGCTGTTCGCTGTCATGAAACTGCCGGTCTCGGCCATCAACGCCCAGAACCTGCGCATGCATAACGGCGAAAACTCGCAGGCGGATATTGAACGCCACGCCAATGCCTGGATTAAAGCCAATCAGGCAAAATTCGACGGCTGGATTGAACAGGCACGCAAAGCCGCTGATAAATAACCCGATCTGAAAAAGCCTCCCGGCGGCCATAGTCATATGGCCGCTTTTTT