Homologs in group_2512

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02130 FBDBKF_02130 100.0 Morganella morganii S1 - Nucleoside transport protein
NLDBIP_00860 NLDBIP_00860 100.0 Morganella morganii S4 - Nucleoside transport protein
LHKJJB_01175 LHKJJB_01175 100.0 Morganella morganii S3 - Nucleoside transport protein
HKOGLL_01215 HKOGLL_01215 100.0 Morganella morganii S5 - Nucleoside transport protein
PMI_RS08990 PMI_RS08990 40.8 Proteus mirabilis HI4320 - NupC/NupG family nucleoside CNT transporter

Distribution of the homologs in the orthogroup group_2512

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2512

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39141 1.61e-100 306 40 3 393 2 nupC Nucleoside permease NupC Bacillus subtilis (strain 168)
P0AFF2 7.13e-96 295 41 5 395 1 nupC Nucleoside permease NupC Escherichia coli (strain K12)
P0AFF3 7.13e-96 295 41 5 395 3 nupC Nucleoside permease NupC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P42312 1.59e-57 196 33 6 375 1 nupG Purine nucleoside transport protein NupG Bacillus subtilis (strain 168)
O32115 1.81e-40 151 29 8 391 3 yutK Uncharacterized transporter YutK Bacillus subtilis (strain 168)
P33024 1.3e-37 143 28 7 379 1 psuT Putative pseudouridine transporter Escherichia coli (strain K12)
P33021 7.47e-35 136 25 7 379 1 nupX Putative nucleoside permease NupX Escherichia coli (strain K12)
P44742 2.16e-34 135 27 8 366 3 HI_0519 Uncharacterized transporter HI_0519 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O25792 2.55e-32 129 26 6 368 3 nupC Nucleoside permease NupC Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ERH8 1.46e-30 127 25 7 374 2 Slc28a3 Solute carrier family 28 member 3 Mus musculus
Q8VIH3 4.27e-30 125 24 5 371 2 Slc28a3 Solute carrier family 28 member 3 Rattus norvegicus
Q9HAS3 7e-27 116 24 6 356 1 SLC28A3 Solute carrier family 28 member 3 Homo sapiens
Q9UA35 3.27e-25 111 23 10 420 2 SLC28A3 Solute carrier family 28 member 3 Eptatretus stoutii
O00337 3.75e-23 105 23 5 379 1 SLC28A1 Sodium/nucleoside cotransporter 1 Homo sapiens
Q62674 2.42e-22 102 22 7 384 1 Slc28a1 Sodium/nucleoside cotransporter 1 Rattus norvegicus
Q62773 2.51e-22 102 23 8 378 1 Slc28a2 Sodium/nucleoside cotransporter 2 Rattus norvegicus
Q9MZT2 3.82e-22 102 21 6 379 2 SLC28A1 Sodium/nucleoside cotransporter 1 Oryctolagus cuniculus
O43868 4.39e-22 102 23 8 378 1 SLC28A2 Sodium/nucleoside cotransporter 2 Homo sapiens
O62667 6.49e-22 101 21 5 370 2 SLC28A1 Sodium/nucleoside cotransporter 1 Sus scrofa
E9PXX9 7.25e-22 101 22 7 385 2 Slc28a1 Sodium/nucleoside cotransporter 1 Mus musculus
O88627 4.52e-21 99 22 8 378 1 Slc28a2 Sodium/nucleoside cotransporter 2 Mus musculus

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_02600
Feature type CDS
Gene -
Product Nucleoside transport protein
Location 503260 - 504453 (strand: 1)
Length 1194 (nucleotides) / 397 (amino acids)

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2512
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01773 Na+ dependent nucleoside transporter N-terminus
PF07662 Na+ dependent nucleoside transporter C-terminus

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1972 Nucleotide transport and metabolism (F) F Nucleoside permease NupC

Protein Sequence

MKYFIFIISLFVIFIAAASISFKAGDIKRKCVPIIVLLLLEGVVAYALLHTSAGLAILHTASGGIEYLIYHANKGIDFVFGDITAKKPVIFVIAALMPLVFICAVIGILKYFGILRLIIITIGYLINKIAKVGKLESFSAVSSVAVGMMAVYVSIKEYIPNLTKPQMYTIAACSLSTVDIAILGAYTQMISPQFVIIGVCLNFFSTFVIVSIINPGDPVEIPERFSGVNSEQHSFFEVITEHMQDGFKLILAIVPVILGFIALISLLNDVFLHIAGITFQGILGYIFSPLAFILGVPWEDSVRFGQIIATKVLANEFVAMIDYIKIQDISPRTETIISVFLISFANFGSVGMIIGCVSAISKKHGKMIAANTFRLVAGSTLVSCLSATMAGIFSGQS

Flanking regions ( +/- flanking 50bp)

TATAACCTGAATAACCAAAACAATTAATATGATACAGGACAGAGGTTTTTATGAAGTATTTTATTTTCATCATCAGCCTTTTCGTGATTTTTATTGCAGCGGCCTCAATCAGTTTTAAGGCTGGTGATATCAAACGAAAGTGTGTTCCGATAATCGTATTATTATTGCTGGAAGGAGTAGTGGCTTATGCACTTCTGCATACCTCTGCCGGGCTGGCAATACTTCATACTGCCTCCGGGGGGATTGAATATCTTATCTATCATGCTAACAAGGGGATCGATTTTGTATTCGGGGATATCACTGCTAAAAAACCCGTAATATTTGTTATTGCCGCACTGATGCCGCTGGTATTTATTTGTGCTGTTATCGGGATCTTAAAATATTTTGGTATTCTCAGGCTGATTATCATCACTATCGGCTATCTGATTAATAAAATAGCGAAAGTCGGCAAACTTGAATCTTTTTCTGCTGTCAGCTCTGTTGCGGTAGGTATGATGGCAGTTTATGTATCGATAAAAGAATATATACCCAATCTGACAAAACCGCAGATGTATACGATTGCGGCATGTTCTTTGTCAACAGTCGATATCGCCATATTGGGTGCGTATACACAAATGATATCACCGCAGTTTGTTATTATCGGCGTATGCCTGAATTTTTTCAGTACGTTTGTTATCGTATCTATTATTAACCCCGGTGATCCGGTTGAGATTCCGGAGAGATTTTCCGGTGTGAACAGTGAACAACACAGTTTCTTCGAGGTTATCACCGAACATATGCAGGATGGTTTTAAACTTATCCTGGCGATAGTTCCTGTTATTCTTGGCTTTATTGCATTAATCAGTTTACTGAATGATGTGTTTTTACACATTGCAGGGATAACGTTTCAGGGTATCCTTGGTTATATTTTTTCACCGCTTGCTTTTATATTGGGTGTGCCGTGGGAAGACAGTGTCCGGTTCGGACAAATTATTGCCACAAAGGTACTGGCCAATGAGTTCGTGGCAATGATTGATTATATAAAAATACAGGATATCAGCCCGAGAACAGAAACGATTATATCAGTATTTCTGATTTCATTTGCGAATTTCGGCTCTGTGGGAATGATTATCGGCTGTGTGTCCGCTATCAGTAAAAAACACGGAAAAATGATAGCCGCAAATACATTCAGGCTGGTTGCCGGCTCAACGCTGGTCAGTTGTCTGTCTGCAACAATGGCCGGTATTTTTTCCGGGCAGAGTTAAACCTGTAGTATGGTTCTGTACATCATAGGCGTGATCAGAGGAGAAGTGAG