VFG048679


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG048679, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 1 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein type VI secretion system protein, Hcp family
VF ID VF0569
Category Effector delivery system
Protein ID WP_014838711
Characteristics Type VI bacterial lipase/phospholipase effectors (Tle) has been sub-divided into Tle1–Tle5. The Tle1–Tle4 families exhibit the GXSXG motif, while Tle5 present a dual HXKXXXXD motif
Function Antibacterial activity
Mechanism The type VI membrane-targeting phospholipase effector Tle1 and Tli1 immunity proteins play a role in intraspecies antagonism
Vf_category_id VFC0086

Occurence in the database

VFG048679 is associated with 1 different proteins (see tab "Protein list" and "Profile")
The 1 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_29 F4V73_RS16845 197547 198038 -1 Hcp family type VI secretion system effector Morganella psychrotolerans