VFG043115


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG043115, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein flagellar motor switch protein FliN
VF ID VF1154
Category Motility
Protein ID WP_001282098
Vf_category_id VFC0204

Occurence in the database

VFG043115 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_458 FBDBKF_00630 105415 105825 1 fliN Flagellar motor switch/type III secretory pathway protein FliN Morganella morganii S1
1 group_458 EHELCC_00915 203043 203453 -1 fliN Flagellar motor switch/type III secretory pathway protein FliN Morganella morganii S2
2 group_458 NLDBIP_02545 476683 477093 1 fliN Flagellar motor switch/type III secretory pathway protein FliN Morganella morganii S4
3 group_458 LHKJJB_04060 83924 84334 1 fliN Flagellar motor switch/type III secretory pathway protein FliN Morganella morganii S3
4 group_458 HKOGLL_02985 203248 203658 -1 fliN Flagellar motor switch/type III secretory pathway protein FliN Morganella morganii S5