VFG035575


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG035575, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein type VI secretion system ATPase TssH
VF ID VF1122
Category Effector delivery system
Protein ID WP_000614302
Vf_category_id VFC0086

Occurence in the database

VFG035575 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_147 FBDBKF_01335 258317 261037 1 tssH type VI secretion system ATPase TssH Morganella morganii S1
1 group_147 EHELCC_00210 47831 50551 -1 tssH type VI secretion system ATPase TssH Morganella morganii S2
2 group_147 NLDBIP_03250 629585 632305 1 tssH type VI secretion system ATPase TssH Morganella morganii S4
3 group_147 LHKJJB_04765 236826 239546 1 tssH type VI secretion system ATPase TssH Morganella morganii S3
4 group_147 HKOGLL_02280 48036 50756 -1 tssH type VI secretion system ATPase TssH Morganella morganii S5
5 group_147 PMI_RS03640 817939 820650 -1 tssH type VI secretion system ATPase TssH Proteus mirabilis HI4320