VFG012633


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG012633, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein TonB-dependent siderophore receptor IreA
VF ID VF1117
Category Nutritional/Metabolic factor
Protein ID WP_000792545
Vf_category_id VFC0272

Occurence in the database

VFG012633 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_52 FBDBKF_11085 40637 42676 1 TonB-dependent receptor Morganella morganii S1
1 group_52 EHELCC_05140 16792 18831 -1 Colicin I receptor Morganella morganii S2
2 group_52 NLDBIP_05460 57857 59896 -1 TonB-dependent receptor Morganella morganii S4
3 group_52 LHKJJB_02340 35381 37420 -1 TonB-dependent receptor Morganella morganii S3
4 group_52 HKOGLL_15720 58821 60860 -1 TonB-dependent receptor Morganella morganii S5
5 group_52 F4V73_RS08185 1701634 1703715 -1 TonB-dependent receptor Morganella psychrotolerans