VFG012580


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG012580, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein iron/manganese ABC transporter ATP-binding protein SitB
VF ID VF1116
Category Nutritional/Metabolic factor
Protein ID WP_000983712
Vf_category_id VFC0272

Occurence in the database

VFG012580 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1814 FBDBKF_13450 68611 69495 1 znuC manganese/iron ABC transporter ATP-binding protein Morganella morganii S1
1 group_1814 EHELCC_08645 205696 206580 -1 znuC manganese/iron ABC transporter ATP-binding protein Morganella morganii S2
2 group_1814 NLDBIP_08970 205696 206580 -1 znuC manganese/iron ABC transporter ATP-binding protein Morganella morganii S4
3 group_1814 LHKJJB_05295 50579 51463 1 znuC manganese/iron ABC transporter ATP-binding protein Morganella morganii S3
4 group_1814 HKOGLL_05620 190287 191171 -1 znuC manganese/iron ABC transporter ATP-binding protein Morganella morganii S5
5 group_1814 F4V73_RS03315 706479 707363 -1 manganese/iron ABC transporter ATP-binding protein Morganella psychrotolerans
6 group_1814 PMI_RS04985 1091185 1092072 -1 manganese/iron ABC transporter ATP-binding protein Proteus mirabilis HI4320