VFG010484


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG010484, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein Hsp60, 60K heat shock protein HtpB
VF ID VF0159
Category Adherence
Protein ID WP_197535716
Function Mediate a complement-independent attachment to mammalian and amoebal host cells
Mechanism Specific receptors have not been identified
Vf_category_id VFC0001

Occurence in the database

VFG010484 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_805 FBDBKF_03800 164047 165693 -1 groL chaperonin GroEL Morganella morganii S1
1 group_805 EHELCC_06735 81410 83056 1 groL chaperonin GroEL Morganella morganii S2
2 group_805 NLDBIP_07060 81283 82929 1 groL chaperonin GroEL Morganella morganii S4
3 group_805 LHKJJB_06595 45029 46675 1 groL chaperonin GroEL Morganella morganii S3
4 group_805 HKOGLL_04335 186712 188358 -1 groL chaperonin GroEL Morganella morganii S5
5 group_805 F4V73_RS11070 350741 352387 1 groL chaperonin GroEL Morganella psychrotolerans
6 group_805 PMI_RS12575 2786681 2788327 -1 groL chaperonin GroEL Proteus mirabilis HI4320