PF22811


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF22811, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF22811
Description Transcriptional repressor NrdR-like, N-terminal domain

Occurence in the database

PF22811 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2257 FBDBKF_17385 7802 8251 -1 nrdR transcriptional regulator NrdR Morganella morganii S1
1 group_2257 EHELCC_17280 7802 8251 -1 nrdR transcriptional regulator NrdR Morganella morganii S2
2 group_2257 NLDBIP_17915 34545 34994 1 nrdR transcriptional regulator NrdR Morganella morganii S4
3 group_2257 LHKJJB_17835 34543 34992 1 nrdR transcriptional regulator NrdR Morganella morganii S3
4 group_2257 HKOGLL_17845 34543 34992 1 nrdR transcriptional regulator NrdR Morganella morganii S5
5 group_2257 F4V73_RS16560 131506 131955 -1 nrdR transcriptional regulator NrdR Morganella psychrotolerans
6 group_2257 PMI_RS00385 108907 109356 1 nrdR transcriptional regulator NrdR Proteus mirabilis HI4320