PF22479


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF22479, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF22479
Description Domain of unknown function (DUF6983)

Occurence in the database

PF22479 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_355 FBDBKF_12720 55147 55440 -1 Phage protein Morganella morganii S1
1 group_355 FBDBKF_17265 31768 32061 -1 Phage protein Morganella morganii S1
2 group_355 EHELCC_01625 323440 323733 1 Phage protein Morganella morganii S2
3 group_355 NLDBIP_01835 356403 356696 -1 Phage protein Morganella morganii S4
4 group_355 LHKJJB_00200 35989 36282 1 Phage protein Morganella morganii S3
5 group_355 HKOGLL_00240 41500 41793 1 Phage protein Morganella morganii S5
6 group_355 F4V73_RS06060 1283712 1284005 -1 hypothetical protein Morganella psychrotolerans
7 group_355 PMI_RS08400 1833208 1833528 -1 hypothetical protein Proteus mirabilis HI4320