PF22276


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF22276, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF22276
Description Tetracyclin repressor-like, C-terminal domain

Occurence in the database

PF22276 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2156 FBDBKF_16225 34381 34974 -1 slmA nucleoid occlusion factor SlmA Morganella morganii S1
1 group_2156 EHELCC_16260 34381 34974 -1 slmA nucleoid occlusion factor SlmA Morganella morganii S2
2 group_2156 NLDBIP_17080 27196 27789 1 slmA nucleoid occlusion factor SlmA Morganella morganii S4
3 group_2156 LHKJJB_17000 30298 30891 1 slmA nucleoid occlusion factor SlmA Morganella morganii S3
4 group_2156 HKOGLL_16840 34381 34974 -1 slmA nucleoid occlusion factor SlmA Morganella morganii S5
5 group_2156 F4V73_RS17375 105929 106522 1 slmA nucleoid occlusion factor SlmA Morganella psychrotolerans
6 group_2156 PMI_RS15590 3466656 3467261 -1 slmA nucleoid occlusion factor SlmA Proteus mirabilis HI4320