PF22200


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF22200, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF22200
Description ExsA N-terminal regulatory domain

Occurence in the database

PF22200 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1647 FBDBKF_10940 13276 14100 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
1 group_1647 EHELCC_05285 45368 46192 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
2 group_1647 NLDBIP_05605 86433 87257 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
3 group_1647 LHKJJB_02485 63957 64781 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
4 group_1647 HKOGLL_15865 87397 88221 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
5 group_1647 F4V73_RS08355 1730493 1731317 1 AraC family transcriptional regulator Morganella psychrotolerans
6 group_1647 PMI_RS09670 2109559 2110395 1 AraC family transcriptional regulator Proteus mirabilis HI4320