PF21917


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF21917, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF21917
Description N-terminal region of NMB0537

Occurence in the database

PF21917 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1540 FBDBKF_09985 89798 90688 1 corC CNNM family magnesium/cobalt transport protein CorC Morganella morganii S1
1 group_1540 EHELCC_04785 281763 282653 1 corC CNNM family magnesium/cobalt transport protein CorC Morganella morganii S2
2 group_1540 NLDBIP_04785 281559 282449 1 corC CNNM family magnesium/cobalt transport protein CorC Morganella morganii S4
3 group_1540 LHKJJB_13845 52929 53819 -1 corC CNNM family magnesium/cobalt transport protein CorC Morganella morganii S3
4 group_1540 HKOGLL_12690 90579 91469 1 corC CNNM family magnesium/cobalt transport protein CorC Morganella morganii S5
5 group_1540 F4V73_RS00360 81917 82807 -1 corC CNNM family magnesium/cobalt transport protein CorC Morganella psychrotolerans
6 group_1540 PMI_RS02190 512047 512928 -1 corC CNNM family magnesium/cobalt transport protein CorC Proteus mirabilis HI4320