PF21770


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF21770, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF21770
Description MGTC/SAPB C-terminal domain

Occurence in the database

PF21770 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_227 FBDBKF_00825 152211 152906 -1 sapB MgtC family protein Morganella morganii S1
1 group_227 EHELCC_00720 155962 156657 1 sapB MgtC family protein Morganella morganii S2
2 group_227 NLDBIP_02740 523479 524174 -1 sapB MgtC family protein Morganella morganii S4
3 group_227 LHKJJB_04255 130720 131415 -1 sapB MgtC family protein Morganella morganii S3
4 group_227 HKOGLL_02790 156167 156862 1 sapB MgtC family protein Morganella morganii S5
5 group_227 F4V73_RS06820 1417154 1417849 -1 MgtC family protein Morganella psychrotolerans
6 group_227 PMI_RS08170 1788474 1789172 -1 MgtC family protein Proteus mirabilis HI4320