PF21621


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF21621, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF21621
Description Mannose-6-phosphate isomerase, cupin domain

Occurence in the database

PF21621 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2678 FBDBKF_04995 3450 4625 1 manA mannose-6-phosphate isomerase Morganella morganii S1
1 group_2678 EHELCC_12595 176869 178044 -1 manA mannose-6-phosphate isomerase Morganella morganii S2
2 group_2678 NLDBIP_12935 176824 177999 -1 manA mannose-6-phosphate isomerase Morganella morganii S4
3 group_2678 LHKJJB_12795 176869 178044 -1 manA mannose-6-phosphate isomerase Morganella morganii S3
4 group_2678 HKOGLL_11410 176869 178044 -1 manA mannose-6-phosphate isomerase Morganella morganii S5
5 group_2678 F4V73_RS05440 1156111 1157286 1 manA mannose-6-phosphate isomerase Morganella psychrotolerans