Homologs in group_2678

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04995 FBDBKF_04995 83.6 Morganella morganii S1 manA mannose-6-phosphate isomerase
EHELCC_12595 EHELCC_12595 83.6 Morganella morganii S2 manA mannose-6-phosphate isomerase
NLDBIP_12935 NLDBIP_12935 83.6 Morganella morganii S4 manA mannose-6-phosphate isomerase
LHKJJB_12795 LHKJJB_12795 83.6 Morganella morganii S3 manA mannose-6-phosphate isomerase
HKOGLL_11410 HKOGLL_11410 83.6 Morganella morganii S5 manA mannose-6-phosphate isomerase

Distribution of the homologs in the orthogroup group_2678

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2678

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P00946 8.16e-172 488 59 2 392 1 manA Mannose-6-phosphate isomerase Escherichia coli (strain K12)
Q83KZ1 1.26e-171 487 59 2 392 3 manA Mannose-6-phosphate isomerase Shigella flexneri
P25081 1.77e-165 471 58 0 391 1 manA Mannose-6-phosphate isomerase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q68FX1 4.91e-60 203 35 14 407 2 Mpi Mannose-6-phosphate isomerase Rattus norvegicus
P34949 2.25e-55 191 33 12 405 1 MPI Mannose-6-phosphate isomerase Homo sapiens
Q3SZI0 2.63e-55 191 33 12 401 2 MPI Mannose-6-phosphate isomerase Bos taurus
A5A6K3 3.22e-55 190 33 12 405 2 MPI Mannose-6-phosphate isomerase Pan troglodytes
Q8HXX2 4.06e-55 190 33 12 405 2 MPI Mannose-6-phosphate isomerase Macaca fascicularis
Q924M7 6.6e-55 189 33 16 407 1 Mpi Mannose-6-phosphate isomerase Mus musculus
P29952 7.64e-52 181 32 14 418 1 PMI40 Mannose-6-phosphate isomerase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q66WM4 9.01e-52 182 32 12 434 2 pmi1 Mannose-6-phosphate isomerase Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)
Q9GP38 1.71e-50 178 34 12 399 2 PMIH Probable mannose-6-phosphate isomerase Echinococcus multilocularis
O43014 1.04e-49 176 32 16 410 3 pmi40 Mannose-6-phosphate isomerase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q8J093 2.36e-49 175 36 12 358 3 PMI40 Mannose-6-phosphate isomerase Ogataea parapolymorpha (strain ATCC 26012 / BCRC 20466 / JCM 22074 / NRRL Y-7560 / DL-1)
Q9M884 6.07e-49 174 32 11 397 1 PMI1 Mannose-6-phosphate isomerase 1 Arabidopsis thaliana
P34948 2.83e-47 170 33 14 432 1 PMI1 Mannose-6-phosphate isomerase Candida albicans (strain SC5314 / ATCC MYA-2876)
Q75AB5 1.34e-45 165 36 13 339 3 PMI1 Mannose-6-phosphate isomerase Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
Q76IQ2 1.79e-45 165 29 14 415 3 PMI1 Mannose-6-phosphate isomerase Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138)
P29951 4.85e-45 164 32 10 432 3 manA Mannose-6-phosphate isomerase Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Q9FZH5 1.68e-43 160 29 12 422 1 PMI2 Mannose-6-phosphate isomerase 2 Arabidopsis thaliana
Q9HFU4 3.43e-43 159 31 15 438 3 MAN1 Mannose-6-phosphate isomerase Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
P34650 6.74e-43 157 30 12 398 3 ZK632.4 Probable mannose-6-phosphate isomerase Caenorhabditis elegans
Q870Y1 1.01e-42 158 29 14 444 3 103E1.170 Mannose-6-phosphate isomerase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Q54PA0 1.25e-42 157 35 9 319 3 mpi Probable mannose-6-phosphate isomerase Dictyostelium discoideum
Q59935 0.000588 45 34 5 105 3 pmi Mannose-6-phosphate isomerase Streptococcus mutans serotype c (strain ATCC 700610 / UA159)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05440
Feature type CDS
Gene manA
Product mannose-6-phosphate isomerase
Location 1156111 - 1157286 (strand: 1)
Length 1176 (nucleotides) / 391 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2678
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF20511 Phosphomannose isomerase type I, catalytic domain
PF20512 Phosphomannose isomerase type I, helical insertion domain
PF21621 Mannose-6-phosphate isomerase, cupin domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1482 Carbohydrate transport and metabolism (G) G Mannose-6-phosphate isomerase, class I

Kegg Ortholog Annotation(s)

Protein Sequence

MLKMQNQVQHYSWGSYTAMTEMYGYPNPDKQPMAELWMGAHPKASSVVTDNSGNVSSLYDYIAADPQGCLGETINRRFHRLPFLFKVLSAAQPLSVQVHPDKAAAEAGFARENLAGIPLDSPVRNYKDDNHKPELVYALTPFKAMNAFRPLPEICTLLSEVAPAHPGIALFIAEPSEEQLSVLFTRLLSMSGETKDRAIGVLKSALNSRQGEPWDTIRKMTEFYPEDNGLFTPLLLNVVELKPGEAMFLYARTPHAYLEGTALEVMANSDNVLRAGLTPKHIDVAELLSNLDFITKPVKSLFMSPHTANGCDIFPVPVDDFSFSVIKLNNQKITLDNNSANILFCVKGQVVITTKTTTLRVIEGESAFLSATERKFEIDGEGIIARVYNTL

Flanking regions ( +/- flanking 50bp)

GTTTTATTGTTACTATCTTATTGTTAATTGTTTAAAAAGAGAGCGAAGCTATGTTAAAAATGCAGAATCAGGTGCAACACTACAGTTGGGGCAGTTATACCGCGATGACAGAAATGTACGGTTACCCGAATCCTGATAAGCAGCCGATGGCGGAATTATGGATGGGCGCACACCCTAAAGCCAGCTCAGTCGTCACGGATAACAGCGGTAACGTCAGCTCTTTATATGATTATATCGCCGCCGACCCGCAGGGCTGTCTGGGGGAAACAATAAACCGCCGCTTTCACCGGTTACCCTTTTTGTTTAAAGTGCTGAGTGCCGCCCAACCGCTTTCCGTTCAGGTGCATCCTGACAAAGCCGCGGCAGAAGCCGGTTTTGCACGGGAAAATCTGGCGGGTATTCCCCTTGATTCTCCTGTTCGTAACTATAAGGATGATAATCATAAGCCAGAGCTGGTTTATGCCCTCACCCCGTTCAAAGCGATGAATGCCTTTCGTCCGCTGCCGGAGATCTGCACACTGCTCAGTGAAGTGGCACCGGCACATCCGGGAATTGCCCTGTTTATTGCAGAACCATCGGAAGAACAGCTTTCTGTATTGTTTACCCGGTTGCTGTCAATGAGCGGTGAAACAAAAGACAGAGCTATTGGTGTGCTGAAATCAGCACTGAACAGCCGTCAGGGAGAGCCGTGGGATACTATCAGGAAGATGACGGAGTTTTACCCGGAAGATAATGGTTTATTCACCCCTCTTCTTCTTAATGTTGTCGAACTGAAACCGGGTGAAGCCATGTTTCTGTATGCCCGGACTCCCCATGCTTACCTGGAGGGAACCGCGCTGGAAGTCATGGCAAACTCAGACAACGTGCTGCGGGCCGGGCTGACACCAAAACATATAGATGTAGCAGAATTACTGAGTAATCTTGATTTCATTACGAAACCGGTAAAAAGCTTATTTATGTCACCACACACCGCAAATGGCTGCGATATTTTCCCGGTTCCGGTCGATGATTTCTCTTTTTCGGTGATTAAATTAAATAATCAGAAAATCACACTGGATAATAATAGCGCTAATATTCTTTTTTGTGTGAAAGGTCAGGTGGTTATCACTACCAAAACCACGACTTTAAGAGTTATCGAAGGTGAATCAGCTTTTCTCTCAGCGACAGAAAGAAAATTTGAAATAGATGGTGAAGGAATCATTGCCCGCGTTTATAATACGCTGTAAGTACTTCCCTGATTTCTCCCGGACAGTTTGCTCTGTAAACTGTCCGTTAA