PF21216


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF21216, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF21216
Description Xaa-Pro dipeptidase, N-terminal domain

Occurence in the database

PF21216 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2205 FBDBKF_16880 2814 4148 -1 pepQ Xaa-Pro dipeptidase Morganella morganii S1
1 group_2205 EHELCC_19550 7310 8644 1 pepQ Xaa-Pro dipeptidase Morganella morganii S2
2 group_2205 NLDBIP_16920 64362 65696 1 pepQ Xaa-Pro dipeptidase Morganella morganii S4
3 group_2205 LHKJJB_16550 2814 4148 -1 pepQ Xaa-Pro dipeptidase Morganella morganii S3
4 group_2205 HKOGLL_17515 2814 4148 -1 pepQ Xaa-Pro dipeptidase Morganella morganii S5
5 group_2205 F4V73_RS18350 2932 4266 -1 pepQ Xaa-Pro dipeptidase Morganella psychrotolerans
6 group_2205 PMI_RS17645 3872453 3873787 1 pepQ Xaa-Pro dipeptidase Proteus mirabilis HI4320