PF20398


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF20398, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF20398
Description Family of unknown function (DUF6691)

Occurence in the database

PF20398 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_881 FBDBKF_04530 103185 103610 -1 YeeE/YedE family protein Morganella morganii S1
1 group_881 EHELCC_05820 162642 163067 -1 YeeE/YedE family protein Morganella morganii S2
2 group_881 NLDBIP_06140 203707 204132 -1 YeeE/YedE family protein Morganella morganii S4
3 group_881 LHKJJB_03020 181231 181656 -1 YeeE/YedE family protein Morganella morganii S3
4 group_881 HKOGLL_06495 103095 103520 -1 YeeE/YedE family protein Morganella morganii S5
5 group_881 F4V73_RS08985 1877962 1878384 -1 YeeE/YedE family protein Morganella psychrotolerans
6 group_881 PMI_RS10355 2277088 2277501 -1 membrane protein Proteus mirabilis HI4320