PF19617


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF19617, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF19617
Description Family of unknown function (DUF6122)

Occurence in the database

PF19617 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_875 FBDBKF_04450 84431 84889 -1 Metal-dependent hydrolase Morganella morganii S1
1 group_875 EHELCC_05740 143888 144346 -1 Metal-dependent hydrolase Morganella morganii S2
2 group_875 NLDBIP_06060 184953 185411 -1 Metal-dependent hydrolase Morganella morganii S4
3 group_875 LHKJJB_02940 162477 162935 -1 Metal-dependent hydrolase Morganella morganii S3
4 group_875 HKOGLL_06415 84341 84799 -1 Metal-dependent hydrolase Morganella morganii S5
5 group_875 F4V73_RS08895 1846510 1846872 -1 DUF6122 family protein Morganella psychrotolerans
6 group_875 PMI_RS06120 1342829 1343227 1 DUF6122 family protein Proteus mirabilis HI4320