Orthogroup:group_944


Homologs in group_944

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05140 FBDBKF_05140 Morganella morganii S1 rluB 23S rRNA pseudouridine(2605) synthase RluB
EHELCC_12450 EHELCC_12450 Morganella morganii S2 rluB 23S rRNA pseudouridine(2605) synthase RluB
NLDBIP_12790 NLDBIP_12790 Morganella morganii S4 rluB 23S rRNA pseudouridine(2605) synthase RluB
LHKJJB_12650 LHKJJB_12650 Morganella morganii S3 rluB 23S rRNA pseudouridine(2605) synthase RluB
HKOGLL_11265 HKOGLL_11265 Morganella morganii S5 rluB 23S rRNA pseudouridine(2605) synthase RluB
F4V73_RS05595 F4V73_RS05595 Morganella psychrotolerans rluB 23S rRNA pseudouridine(2605) synthase RluB
PMI_RS06465 PMI_RS06465 Proteus mirabilis HI4320 rluB 23S rRNA pseudouridine(2605) synthase RluB

Distribution of group_944 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_944 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_944

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_944.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rluB 7

Product

# Product Occurence
1 23S rRNA pseudouridine(2605) synthase RluB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1187 7 J Translation, ribosomal structure and biogenesis (J) Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06178 7 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00849 7 RNA pseudouridylate synthase
PF01479 7 S4 domain

Annotations of the 73 SwissProt hits

Annotation Number of occurrences
Dual-specificity RNA pseudouridine synthase RluF 6
Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic 1
Ribosomal large subunit pseudouridine synthase B 21
Ribosomal large subunit pseudouridine synthase E 15
Ribosomal small subunit pseudouridine synthase A 13
Uncharacterized RNA pseudouridine synthase BB_0129 1
Uncharacterized RNA pseudouridine synthase HP_1459 1
Uncharacterized RNA pseudouridine synthase ML1370 1
Uncharacterized RNA pseudouridine synthase MT1751.1 1
Uncharacterized RNA pseudouridine synthase Mb1738 1
Uncharacterized RNA pseudouridine synthase RBE_0321 1
Uncharacterized RNA pseudouridine synthase RC0807 1
Uncharacterized RNA pseudouridine synthase RF_0863 1
Uncharacterized RNA pseudouridine synthase RP544 1
Uncharacterized RNA pseudouridine synthase RT0532 1
Uncharacterized RNA pseudouridine synthase Rv1711 1
Uncharacterized RNA pseudouridine synthase YtzG 1
Uncharacterized RNA pseudouridine synthase aq_1464 1
Uncharacterized RNA pseudouridine synthase aq_554 1
Uncharacterized RNA pseudouridine synthase jhp_1352 1
Uncharacterized RNA pseudouridine synthase slr0361 1
Uncharacterized RNA pseudouridine synthase slr0612 1

Protein length

Min length 308
Max length 310
Mean length (sd) 309.7 (0.8)
Median length 310.0

Protein length distribution