PF18807


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF18807, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 10 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF18807
Description Tripartite Tc toxins repeat

Occurence in the database

PF18807 is associated with 10 different proteins (see tab "Protein list" and "Profile")
The 10 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_160 FBDBKF_13030 111669 114224 -1 RHS repeat domain-containing protein Morganella morganii S1
1 group_160 FBDBKF_20435 589 3162 -1 RHS repeat domain-containing protein Morganella morganii S1
2 group_160 EHELCC_06345 281701 284256 -1 RHS repeat domain-containing protein Morganella morganii S2
3 group_160 EHELCC_19745 12 2585 1 RHS repeat domain-containing protein Morganella morganii S2
4 group_160 NLDBIP_06665 322766 325321 -1 RHS repeat domain-containing protein Morganella morganii S4
5 group_160 NLDBIP_19760 589 3162 -1 RHS repeat domain-containing protein Morganella morganii S4
6 group_160 LHKJJB_03545 300290 302845 -1 RHS repeat domain-containing protein Morganella morganii S3
7 group_160 LHKJJB_19725 589 3162 -1 RHS repeat domain-containing protein Morganella morganii S3
8 group_160 HKOGLL_07020 222154 224709 -1 RHS repeat domain-containing protein Morganella morganii S5
9 group_160 HKOGLL_19640 589 3162 -1 RHS repeat domain-containing protein Morganella morganii S5