PF17862


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF17862, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF17862
Description AAA+ lid domain

Occurence in the database

PF17862 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1398 FBDBKF_08630 107068 109017 1 ftsH ATP-dependent zinc metalloprotease FtsH Morganella morganii S1
1 group_1398 EHELCC_12895 54708 56657 -1 ftsH ATP-dependent zinc metalloprotease FtsH Morganella morganii S2
2 group_1398 NLDBIP_13235 54708 56657 -1 ftsH ATP-dependent zinc metalloprotease FtsH Morganella morganii S4
3 group_1398 LHKJJB_13320 105786 107735 1 ftsH ATP-dependent zinc metalloprotease FtsH Morganella morganii S3
4 group_1398 HKOGLL_11710 54708 56657 -1 ftsH ATP-dependent zinc metalloprotease FtsH Morganella morganii S5
5 group_1398 F4V73_RS09855 74175 76118 1 ftsH ATP-dependent zinc metalloprotease FtsH Morganella psychrotolerans
6 group_1398 PMI_RS16985 3737506 3739446 1 ftsH ATP-dependent zinc metalloprotease FtsH Proteus mirabilis HI4320