Orthogroup:group_1454


Homologs in group_1454

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09255 FBDBKF_09255 Morganella morganii S1 mscS Small-conductance mechanosensitive channel
EHELCC_10155 EHELCC_10155 Morganella morganii S2 mscS Small-conductance mechanosensitive channel
NLDBIP_10500 NLDBIP_10500 Morganella morganii S4 mscS Small-conductance mechanosensitive channel
LHKJJB_10855 LHKJJB_10855 Morganella morganii S3 mscS Small-conductance mechanosensitive channel
HKOGLL_13915 HKOGLL_13915 Morganella morganii S5 mscS Small-conductance mechanosensitive channel
F4V73_RS10715 F4V73_RS10715 Morganella psychrotolerans - mechanosensitive ion channel family protein
PMI_RS10665 PMI_RS10665 Proteus mirabilis HI4320 - mechanosensitive ion channel family protein

Distribution of group_1454 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1454 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1454

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1454.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mscS 5
2 - 2

Product

# Product Occurence
1 Small-conductance mechanosensitive channel 5
2 mechanosensitive ion channel family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0668 7 M Cell wall/membrane/envelope biogenesis (M) Small-conductance mechanosensitive channel

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K16052 7 MscS family membrane protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00924 7 Mechanosensitive ion channel, beta-domain
PF21082 7 Mechanosensitive ion channel MscS, C-terminal
PF21088 7 Mechanosensitive ion channel, transmembrane helices 2/3

Annotations of the 31 SwissProt hits

Annotation Number of occurrences
Large-conductance mechanosensitive channel MscMJLR 1
Low conductance mechanosensitive channel YnaI 2
Mechanosensitive channel MscK 1
Mechanosensitive ion channel protein 1, mitochondrial 1
Mechanosensitive ion channel protein 2, chloroplastic 1
Mechanosensitive ion channel protein 3, chloroplastic 1
Miniconductance mechanosensitive channel MscM 1
Miniconductance mechanosensitive channel YbdG 2
Small-conductance mechanosensitive channel 7
Small-conductance mechanosensitive channel MscMJ 1
Uncharacterized MscS family protein AF_1546 1
Uncharacterized MscS family protein BU452 1
Uncharacterized MscS family protein BUsg_437 1
Uncharacterized MscS family protein HI_0195.1 1
Uncharacterized MscS family protein HP_0415 1
Uncharacterized MscS family protein YfkC 1
Uncharacterized MscS family protein YhdY 1
Uncharacterized MscS family protein YkuT 1
Uncharacterized MscS family protein aq_812 1
Uncharacterized MscS family protein bbp_402 1
Uncharacterized MscS family protein jhp_0969 1
Uncharacterized MscS family protein slr0639 1
Uncharacterized protein Cgl1270/cg1434 1

Protein length

Min length 341
Max length 348
Mean length (sd) 345.6 (2.1)
Median length 346.0

Protein length distribution