PF17765


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF17765, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF17765
Description MmyB-like transcription regulator ligand binding domain

Occurence in the database

PF17765 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2573 FBDBKF_02760 248860 249657 1 HTH cro/C1-type domain-containing protein Morganella morganii S1
1 group_2573 EHELCC_03230 636680 637477 1 HTH cro/C1-type domain-containing protein Morganella morganii S2
2 group_2573 NLDBIP_00230 42659 43456 -1 HTH cro/C1-type domain-containing protein Morganella morganii S4
3 group_2573 LHKJJB_01805 349229 350026 1 HTH cro/C1-type domain-containing protein Morganella morganii S3
4 group_2573 HKOGLL_01845 354740 355537 1 HTH cro/C1-type domain-containing protein Morganella morganii S5
5 group_2573 F4V73_RS05235 1114870 1115667 1 helix-turn-helix transcriptional regulator Morganella psychrotolerans