PF17136


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF17136
Protein list: lists the 7 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF17136
Description Ribosomal proteins 50S L24/mitochondrial 39S L24

Occurence in the database

PF17136 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2421 FBDBKF_19190 17595 17909 -1 rplX 50S ribosomal protein L24 Morganella morganii S1
1 group_2421 EHELCC_18935 17595 17909 -1 rplX 50S ribosomal protein L24 Morganella morganii S2
2 group_2421 NLDBIP_18950 17595 17909 -1 rplX 50S ribosomal protein L24 Morganella morganii S4
3 group_2421 LHKJJB_18805 17595 17909 -1 rplX 50S ribosomal protein L24 Morganella morganii S3
4 group_2421 HKOGLL_18540 17595 17909 -1 rplX 50S ribosomal protein L24 Morganella morganii S5
5 group_2421 F4V73_RS18975 12428 12742 1 rplX 50S ribosomal protein L24 Morganella psychrotolerans
6 group_2421 PMI_RS16205 3587912 3588226 1 rplX 50S ribosomal protein L24 Proteus mirabilis HI4320