PF17092
Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF17092
Protein list: lists the 7 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.
Description
External link |
PF17092 |
Description |
Penicillin-binding protein OB-like domain |
Occurence in the database
PF17092 is associated with 7 different
proteins
|
The 7 proteins are classified into 1 different orthogroup(s)
|
|
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_1641 |
FBDBKF_10385 |
32392 |
34845 |
-1 |
mrcA |
peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA |
Morganella morganii S1 |
1 |
group_1641 |
EHELCC_14720 |
32382 |
34835 |
-1 |
mrcA |
peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA |
Morganella morganii S2 |
2 |
group_1641 |
NLDBIP_14550 |
32382 |
34835 |
-1 |
mrcA |
peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA |
Morganella morganii S4 |
3 |
group_1641 |
LHKJJB_14795 |
106891 |
109344 |
1 |
mrcA |
peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA |
Morganella morganii S3 |
4 |
group_1641 |
HKOGLL_13415 |
106891 |
109344 |
1 |
mrcA |
peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA |
Morganella morganii S5 |
5 |
group_1641 |
F4V73_RS14080 |
28912 |
31437 |
-1 |
mrcA |
peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA |
Morganella psychrotolerans |
6 |
group_1641 |
PMI_RS14945 |
3317025 |
3319559 |
-1 |
mrcA |
peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA |
Proteus mirabilis HI4320 |