PF17092


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF17092, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF17092
Description Penicillin-binding protein OB-like domain

Occurence in the database

PF17092 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1593 FBDBKF_10385 32392 34845 -1 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA Morganella morganii S1
1 group_1593 EHELCC_14720 32382 34835 -1 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA Morganella morganii S2
2 group_1593 NLDBIP_14550 32382 34835 -1 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA Morganella morganii S4
3 group_1593 LHKJJB_14795 106891 109344 1 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA Morganella morganii S3
4 group_1593 HKOGLL_13415 106891 109344 1 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA Morganella morganii S5
5 group_1593 F4V73_RS14080 28912 31437 -1 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA Morganella psychrotolerans
6 group_1593 PMI_RS14945 3317025 3319559 -1 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA Proteus mirabilis HI4320