PF16916


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF16916, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF16916
Description Dimerisation domain of Zinc Transporter

Occurence in the database

PF16916 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_337 FBDBKF_11005 22384 23331 1 fieF Divalent metal cation (Fe/Co/Zn/Cd) efflux pump Morganella morganii S1
1 group_337 EHELCC_05220 36137 37084 -1 fieF Divalent metal cation (Fe/Co/Zn/Cd) efflux pump Morganella morganii S2
2 group_337 NLDBIP_05540 77202 78149 -1 fieF Divalent metal cation (Fe/Co/Zn/Cd) efflux pump Morganella morganii S4
3 group_337 LHKJJB_02420 54726 55673 -1 fieF Divalent metal cation (Fe/Co/Zn/Cd) efflux pump Morganella morganii S3
4 group_337 HKOGLL_15800 78166 79113 -1 fieF Divalent metal cation (Fe/Co/Zn/Cd) efflux pump Morganella morganii S5
5 group_337 F4V73_RS08220 1709418 1710302 -1 cation diffusion facilitator family transporter Morganella psychrotolerans
6 group_337 PMI_RS09625 2102982 2103899 -1 cation diffusion facilitator family transporter Proteus mirabilis HI4320