PF16901


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF16901, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF16901
Description C-terminal domain of alpha-glycerophosphate oxidase

Occurence in the database

PF16901 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1619 FBDBKF_10680 103838 105325 -1 glpD glycerol-3-phosphate dehydrogenase Morganella morganii S1
1 group_1619 EHELCC_15015 103828 105315 -1 glpD glycerol-3-phosphate dehydrogenase Morganella morganii S2
2 group_1619 NLDBIP_14845 103828 105315 -1 glpD glycerol-3-phosphate dehydrogenase Morganella morganii S4
3 group_1619 LHKJJB_14500 36411 37898 1 glpD glycerol-3-phosphate dehydrogenase Morganella morganii S3
4 group_1619 HKOGLL_13120 36411 37898 1 glpD glycerol-3-phosphate dehydrogenase Morganella morganii S5
5 group_1619 F4V73_RS14395 106995 108482 -1 glpD glycerol-3-phosphate dehydrogenase Morganella psychrotolerans
6 group_1619 PMI_RS14485 3211685 3213178 1 glpD glycerol-3-phosphate dehydrogenase Proteus mirabilis HI4320