PF16325


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF16325, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF16325
Description Peptidase family U32 C-terminal domain

Occurence in the database

PF16325 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2186 FBDBKF_16460 14950 16341 -1 yegQ tRNA 5-hydroxyuridine modification protein YegQ Morganella morganii S1
1 group_2186 EHELCC_08325 131936 133327 -1 yegQ tRNA 5-hydroxyuridine modification protein YegQ Morganella morganii S2
2 group_2186 NLDBIP_08650 131936 133327 -1 yegQ tRNA 5-hydroxyuridine modification protein YegQ Morganella morganii S4
3 group_2186 LHKJJB_05615 123832 125223 1 yegQ tRNA 5-hydroxyuridine modification protein YegQ Morganella morganii S3
4 group_2186 HKOGLL_05300 116527 117918 -1 yegQ tRNA 5-hydroxyuridine modification protein YegQ Morganella morganii S5
5 group_2186 F4V73_RS02975 630747 632138 -1 yegQ tRNA 5-hydroxyuridine modification protein YegQ Morganella psychrotolerans
6 group_2186 PMI_RS07755 1697955 1699334 1 yegQ tRNA 5-hydroxyuridine modification protein YegQ Proteus mirabilis HI4320