PF14348

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF14348
Protein list: lists the 17 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF14348
Description Domain of unknown function (DUF4400)

Occurence in the database

PF14348 is associated with 17 different proteins
The 17 proteins are classified into 4 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2669 FBDBKF_04020 200411 201160 -1 Integrating conjugative element membrane protein, PFL_4697 family Morganella morganii S1
1 group_3494 FBDBKF_16850 46306 46620 -1 Integrating conjugative element membrane protein Morganella morganii S1
2 group_3594 FBDBKF_19860 16199 16957 1 TIGR03747 family integrating conjugative element membrane protein Morganella morganii S1
3 group_2669 EHELCC_06515 45943 46692 1 Integrating conjugative element membrane protein, PFL_4697 family Morganella morganii S2
4 group_3594 EHELCC_10585 162893 163651 1 TIGR03747 family integrating conjugative element membrane protein Morganella morganii S2
5 group_3494 EHELCC_10610 167151 167465 1 Integrating conjugative element membrane protein Morganella morganii S2
6 group_2669 NLDBIP_06840 45816 46565 1 Integrating conjugative element membrane protein, PFL_4697 family Morganella morganii S4
7 group_3594 NLDBIP_10930 141164 141922 1 TIGR03747 family integrating conjugative element membrane protein Morganella morganii S4
8 group_3494 NLDBIP_10955 145422 145736 1 Integrating conjugative element membrane protein Morganella morganii S4
9 group_2669 LHKJJB_06375 9562 10311 1 Integrating conjugative element membrane protein, PFL_4697 family Morganella morganii S3
10 group_3494 LHKJJB_10400 45792 46106 -1 Integrating conjugative element membrane protein Morganella morganii S3
11 group_3594 LHKJJB_10425 49606 50364 -1 TIGR03747 family integrating conjugative element membrane protein Morganella morganii S3
12 group_2669 HKOGLL_04555 223076 223825 -1 Integrating conjugative element membrane protein, PFL_4697 family Morganella morganii S5
13 group_3494 HKOGLL_16565 45801 46115 -1 Integrating conjugative element membrane protein Morganella morganii S5
14 group_3594 HKOGLL_16590 49615 50373 -1 TIGR03747 family integrating conjugative element membrane protein Morganella morganii S5
15 group_4060 PMI_RS12225 2699417 2700052 -1 DUF4400 domain-containing protein Proteus mirabilis HI4320
16 group_2669 PMI_RS12775 2823335 2824084 -1 TIGR03747 family integrating conjugative element membrane protein Proteus mirabilis HI4320