PF14348


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF14348, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 17 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF14348
Description Domain of unknown function (DUF4400)

Occurence in the database

PF14348 is associated with 17 different proteins (see tab "Protein list" and "Profile")
The 17 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2641 FBDBKF_04020 200411 201160 -1 Integrating conjugative element membrane protein, PFL_4697 family Morganella morganii S1
1 group_3491 FBDBKF_16850 46306 46620 -1 Integrating conjugative element membrane protein Morganella morganii S1
2 group_3595 FBDBKF_19860 16199 16957 1 TIGR03747 family integrating conjugative element membrane protein Morganella morganii S1
3 group_2641 EHELCC_06515 45943 46692 1 Integrating conjugative element membrane protein, PFL_4697 family Morganella morganii S2
4 group_3595 EHELCC_10585 162893 163651 1 TIGR03747 family integrating conjugative element membrane protein Morganella morganii S2
5 group_3491 EHELCC_10610 167151 167465 1 Integrating conjugative element membrane protein Morganella morganii S2
6 group_2641 NLDBIP_06840 45816 46565 1 Integrating conjugative element membrane protein, PFL_4697 family Morganella morganii S4
7 group_3595 NLDBIP_10930 141164 141922 1 TIGR03747 family integrating conjugative element membrane protein Morganella morganii S4
8 group_3491 NLDBIP_10955 145422 145736 1 Integrating conjugative element membrane protein Morganella morganii S4
9 group_2641 LHKJJB_06375 9562 10311 1 Integrating conjugative element membrane protein, PFL_4697 family Morganella morganii S3
10 group_3491 LHKJJB_10400 45792 46106 -1 Integrating conjugative element membrane protein Morganella morganii S3
11 group_3595 LHKJJB_10425 49606 50364 -1 TIGR03747 family integrating conjugative element membrane protein Morganella morganii S3
12 group_2641 HKOGLL_04555 223076 223825 -1 Integrating conjugative element membrane protein, PFL_4697 family Morganella morganii S5
13 group_3491 HKOGLL_16565 45801 46115 -1 Integrating conjugative element membrane protein Morganella morganii S5
14 group_3595 HKOGLL_16590 49615 50373 -1 TIGR03747 family integrating conjugative element membrane protein Morganella morganii S5
15 group_4586 PMI_RS12225 2699417 2700052 -1 DUF4400 domain-containing protein Proteus mirabilis HI4320
16 group_2641 PMI_RS12775 2823335 2824084 -1 TIGR03747 family integrating conjugative element membrane protein Proteus mirabilis HI4320