PF13793


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13793, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13793
Description N-terminal domain of ribose phosphate pyrophosphokinase

Occurence in the database

PF13793 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_607 FBDBKF_01905 68364 69311 -1 prs ribose-phosphate diphosphokinase Morganella morganii S1
1 group_607 EHELCC_02375 456184 457131 -1 prs ribose-phosphate diphosphokinase Morganella morganii S2
2 group_607 NLDBIP_01085 223005 223952 1 prs ribose-phosphate diphosphokinase Morganella morganii S4
3 group_607 LHKJJB_00950 168733 169680 -1 prs ribose-phosphate diphosphokinase Morganella morganii S3
4 group_607 HKOGLL_00990 174244 175191 -1 prs ribose-phosphate diphosphokinase Morganella morganii S5
5 group_607 F4V73_RS04250 898581 899528 -1 prs ribose-phosphate diphosphokinase Morganella psychrotolerans
6 group_607 PMI_RS05245 1146469 1147416 -1 prs ribose-phosphate diphosphokinase Proteus mirabilis HI4320