PF13677


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13677, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13677
Description Membrane MotB of proton-channel complex MotA/MotB

Occurence in the database

PF13677 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_485 FBDBKF_00800 147561 148562 -1 motB flagellar motor protein MotB Morganella morganii S1
1 group_485 EHELCC_00745 160306 161307 1 motB flagellar motor protein MotB Morganella morganii S2
2 group_485 NLDBIP_02715 518829 519830 -1 motB flagellar motor protein MotB Morganella morganii S4
3 group_485 LHKJJB_04230 126070 127071 -1 motB flagellar motor protein MotB Morganella morganii S3
4 group_485 HKOGLL_02815 160511 161512 1 motB flagellar motor protein MotB Morganella morganii S5
5 group_485 F4V73_RS06800 1412468 1413490 -1 motB flagellar motor protein MotB Morganella psychrotolerans
6 group_485 PMI_RS08150 1782138 1783187 -1 motB flagellar motor protein MotB Proteus mirabilis HI4320