Orthogroup:group_562


Homologs in group_562

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01445 FBDBKF_01445 Morganella morganii S1 rseC SoxR-reducing system protein RseC
EHELCC_00100 EHELCC_00100 Morganella morganii S2 rseC SoxR-reducing system protein RseC
NLDBIP_03360 NLDBIP_03360 Morganella morganii S4 rseC SoxR-reducing system protein RseC
LHKJJB_04875 LHKJJB_04875 Morganella morganii S3 rseC SoxR-reducing system protein RseC
HKOGLL_02170 HKOGLL_02170 Morganella morganii S5 rseC SoxR-reducing system protein RseC
F4V73_RS01960 F4V73_RS01960 Morganella psychrotolerans rseC SoxR-reducing system protein RseC
PMI_RS09335 PMI_RS09335 Proteus mirabilis HI4320 rseC SoxR-reducing system protein RseC

Distribution of group_562 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_562 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_562

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_562.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rseC 7

Product

# Product Occurence
1 SoxR-reducing system protein RseC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3086 7 T Signal transduction mechanisms (T) RseC, positive regulator of sigma E activity

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03803 7 sigma-E factor negative regulatory protein RseC - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04246 7 Positive regulator of sigma(E), RseC/MucC

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Protein RseC 1
Uncharacterized protein HI_0589 1
Uncharacterized protein HI_0850 1

Protein length

Min length 154
Max length 155
Mean length (sd) 154.7 (0.5)
Median length 155.0

Protein length distribution