PF13599


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13599, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13599
Description Pentapeptide repeats (9 copies)

Occurence in the database

PF13599 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2694 FBDBKF_05530 115971 116570 -1 yjbI Uncharacterized conserved protein YjbI, contains pentapeptide repeats Morganella morganii S1
1 group_2694 EHELCC_12060 64924 65523 1 yjbI Uncharacterized conserved protein YjbI, contains pentapeptide repeats Morganella morganii S2
2 group_2694 NLDBIP_12400 64879 65478 1 yjbI Uncharacterized conserved protein YjbI, contains pentapeptide repeats Morganella morganii S4
3 group_2694 LHKJJB_12260 64924 65523 1 yjbI Uncharacterized conserved protein YjbI, contains pentapeptide repeats Morganella morganii S3
4 group_2694 HKOGLL_10875 64924 65523 1 yjbI Uncharacterized conserved protein YjbI, contains pentapeptide repeats Morganella morganii S5
5 group_3799 F4V73_RS00055 12872 13978 -1 pentapeptide repeat-containing protein Morganella psychrotolerans
6 group_3799 F4V73_RS00060 13988 16201 -1 pentapeptide repeat-containing protein Morganella psychrotolerans
7 group_2694 F4V73_RS03775 800422 801021 1 pentapeptide repeat-containing protein Morganella psychrotolerans