Homologs in group_4873

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4873

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4873

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q52118 1.37e-09 63 22 2 216 4 None Uncharacterized protein in mobD 3'region Pantoea stewartii subsp. stewartii
Q52118 6.78e-07 55 28 2 132 4 None Uncharacterized protein in mobD 3'region Pantoea stewartii subsp. stewartii
Q52118 8.05e-07 55 27 4 171 4 None Uncharacterized protein in mobD 3'region Pantoea stewartii subsp. stewartii
Q52118 1.63e-05 51 20 3 270 4 None Uncharacterized protein in mobD 3'region Pantoea stewartii subsp. stewartii
Q52118 0.000179 47 17 5 252 4 None Uncharacterized protein in mobD 3'region Pantoea stewartii subsp. stewartii
P74221 8.97e-09 61 25 3 222 4 slr1152 Uncharacterized protein slr1152 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O06733 2.07e-07 55 25 5 185 4 yisX Uncharacterized protein YisX Bacillus subtilis (strain 168)
P73709 3.88e-07 56 20 7 293 4 slr1819 Uncharacterized protein slr1819 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q8ZMM8 1.36e-06 54 27 6 193 1 pipB2 Secreted effector protein PipB2 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57KZ6 3.23e-06 53 27 8 213 3 pipB2 Secreted effector protein PipB2 Salmonella choleraesuis (strain SC-B67)
Q5PEX4 3.47e-06 53 27 8 213 3 pipB2 Secreted effector protein PipB2 Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P05530 1.12e-05 50 22 4 167 3 mcbG Protein McbG Escherichia coli
P05530 1.77e-05 49 24 4 161 3 mcbG Protein McbG Escherichia coli
Q8Z4G9 2.66e-05 50 25 6 186 3 pipB2 Secreted effector protein PipB2 Salmonella typhi
Q9SE95 6.58e-05 49 22 1 183 1 FIP2 FH protein interacting protein FIP2 Arabidopsis thaliana
B1WVN5 6.96e-05 47 29 1 102 1 rfr32 Pentapeptide repeat protein Rfr32 Crocosphaera subtropica (strain ATCC 51142 / BH68)
A0QSY0 0.00023 46 25 2 128 1 mfpA Pentapeptide repeat protein MfpA Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
A0QSY0 0.000347 45 24 2 140 1 mfpA Pentapeptide repeat protein MfpA Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
I6YBX3 0.000282 45 22 3 164 1 mfpA Pentapeptide repeat protein MfpA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00060
Feature type CDS
Gene -
Product pentapeptide repeat-containing protein
Location 13988 - 16201 (strand: -1)
Length 2214 (nucleotides) / 737 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4873
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF00805 Pentapeptide repeats (8 copies)
PF09937 Uncharacterized protein conserved in bacteria (DUF2169)
PF13599 Pentapeptide repeats (9 copies)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5351 Function unknown (S) S Uncharacterized conserved protein, DUF2169 domain

Protein Sequence

MMRIIRPQQLAVLRNSYQIGRECRSGISVVAGSYLSAPDHFVTEAQIWQAWKSAPLSFRMLDTAEPKPHAEYILAGHAGTGQPLTELDVAVKVGSLSRAWRIEGELFTRAAMDHPRAPGGKSCKENPLGNDRRSGQEPLLTEARADGRPDPYQFLAAPSPVPPDFYVRRKHLDAIAPIMADKQYRESWFPGLPPSVDRRYFQMAPPSQWLAASQWPRDIPFELHGFRPDNNVISGHFPSVRARAFIQTEDAAALEEITLEKKTLWLLPDDDLCLMIFTGSIPVPHLFATPAVTLLTALDTDGAERDSGHYQQVYNRRSQNDTANFEFLRDRELMPENMMFNVIRDMAEHPDSQRYNARPLTKQDADEFYQDIENAIALHKQHQQPYFAAPQPATAQTPAVPDINILRKQITGTWQENEPVSEHRDINHTSFAKAVLQGKTFKYCNFSQCDFSEAQLLQCGFEHCKFTSCLFTDAAITDTQLTGGCFQLTDLSRSCFTGTLWEKVTLDDCVLNKTVLAKCRWSQCLVNDTQINHAGFTECEIDGVMLSAVSLAHTVFRHSTLTSCIADKNEASHIQFTGSTLTKSSVTGGNWTESQFTGSSLDSITSGQDADFSGSSFTDCRLNKTGFSNAGLRNCRFTHCELTETCADGSDLTGAVFTACDMAGLRLKDAIVIHASFIKSSLQQAMLYNADLRDTTFKQCNFAGANLAMTYANSGTHFDLCLMDGVHLLPRRFRLTA

Flanking regions ( +/- flanking 50bp)

GTGTCGACCTGAAAACGGTCGGAATGCAGAGTAAAAATTAAAAGGAAGGCATGATGCGTATTATTCGTCCTCAGCAACTTGCTGTACTCAGAAACAGTTATCAGATTGGCAGGGAGTGCCGGTCAGGTATCAGTGTGGTCGCGGGCAGTTATTTATCTGCTCCCGACCATTTTGTGACTGAAGCACAGATTTGGCAGGCATGGAAGTCTGCCCCTCTTTCATTTCGTATGTTAGATACCGCTGAACCGAAACCGCACGCTGAATATATCCTTGCCGGACATGCCGGAACCGGTCAGCCTCTGACGGAACTGGATGTGGCGGTCAAAGTAGGATCACTCAGCCGTGCGTGGCGGATTGAGGGCGAATTGTTTACCCGGGCAGCGATGGATCATCCCCGGGCACCCGGCGGTAAAAGCTGCAAAGAGAACCCGTTGGGTAATGATCGCCGCAGTGGGCAGGAACCGCTTCTGACGGAGGCCCGGGCCGATGGACGGCCTGATCCTTATCAGTTTCTGGCCGCCCCGTCACCGGTTCCGCCGGATTTCTATGTCCGCCGCAAACATCTGGATGCTATTGCGCCGATCATGGCAGATAAGCAGTATCGGGAAAGCTGGTTTCCGGGATTACCGCCGTCCGTTGATCGCCGTTATTTTCAGATGGCTCCGCCGTCACAGTGGTTAGCCGCATCACAATGGCCGCGTGACATTCCCTTTGAATTACACGGATTCAGACCGGATAACAATGTGATTTCCGGGCATTTTCCGTCTGTCCGCGCCAGGGCGTTTATTCAGACAGAAGACGCAGCAGCTCTTGAAGAGATAACCTTAGAGAAAAAAACGTTATGGTTGTTACCGGATGACGACCTGTGCCTGATGATTTTTACCGGCAGCATCCCTGTTCCGCATTTATTTGCCACCCCCGCCGTCACACTGCTGACCGCGCTGGATACTGACGGTGCAGAGCGGGATTCCGGTCATTATCAACAGGTGTATAACCGGCGCAGTCAGAACGATACGGCTAACTTTGAATTTCTCCGTGACAGGGAACTGATGCCGGAGAATATGATGTTCAATGTGATCAGGGACATGGCAGAGCACCCTGATTCTCAGCGTTATAATGCCCGTCCGCTGACAAAGCAGGATGCAGATGAATTTTATCAGGATATCGAAAACGCCATCGCGCTCCATAAACAACATCAGCAACCGTATTTCGCCGCCCCGCAACCGGCAACGGCACAAACACCGGCGGTTCCGGATATAAACATATTGCGCAAACAAATAACCGGAACCTGGCAGGAAAATGAACCGGTTAGCGAACACCGGGATATTAACCATACCTCTTTTGCAAAAGCCGTATTGCAGGGAAAAACCTTTAAATACTGTAATTTCAGTCAGTGTGATTTCAGTGAGGCACAACTGCTGCAATGCGGCTTTGAGCACTGCAAATTTACCTCCTGCCTGTTTACTGATGCCGCCATAACCGATACACAACTTACCGGCGGCTGCTTTCAGCTTACCGACCTGAGCCGGAGCTGCTTTACCGGCACACTCTGGGAAAAAGTGACACTGGATGACTGTGTACTGAATAAAACTGTGCTGGCGAAATGCCGCTGGTCACAATGTCTGGTCAATGATACTCAGATTAACCATGCCGGTTTTACAGAGTGTGAGATTGATGGCGTCATGCTCTCTGCCGTCAGCCTTGCACATACTGTTTTCCGGCACAGCACACTGACATCCTGTATTGCCGATAAAAATGAAGCATCACATATACAGTTTACCGGCAGCACACTGACGAAGAGTTCGGTCACCGGCGGAAACTGGACAGAGAGTCAGTTTACCGGCAGCTCACTGGACAGTATCACCTCAGGTCAGGATGCGGATTTTTCCGGCAGCAGCTTCACGGATTGCCGTCTGAATAAGACCGGATTCAGTAATGCCGGATTACGCAACTGCCGCTTTACCCATTGTGAACTGACCGAAACCTGCGCCGACGGCAGTGACCTGACCGGTGCTGTTTTTACCGCCTGCGATATGGCAGGACTGCGTTTAAAAGATGCCATCGTTATTCACGCCTCTTTTATCAAAAGCAGCCTGCAACAGGCCATGTTGTATAACGCCGATCTCCGCGATACCACATTTAAGCAGTGCAACTTTGCCGGAGCAAACCTTGCCATGACCTACGCCAATTCCGGCACTCACTTCGATTTATGTTTGATGGACGGCGTCCATCTGCTGCCCCGCCGCTTCCGGCTGACGGCCTGACAGGAGTTCATGATGAACAAAACAGAAAAACACATCAGGTCATTACAGCC