PF13589


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13589, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13589
Description Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

Occurence in the database

PF13589 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1363 FBDBKF_08445 68582 70480 1 mutL DNA mismatch repair endonuclease MutL Morganella morganii S1
1 group_2134 FBDBKF_16020 57189 59063 1 htpG molecular chaperone HtpG Morganella morganii S1
2 group_1363 EHELCC_13080 93245 95143 -1 mutL DNA mismatch repair endonuclease MutL Morganella morganii S2
3 group_2134 EHELCC_18625 14623 16497 1 htpG molecular chaperone HtpG Morganella morganii S2
4 group_1363 NLDBIP_13420 93245 95143 -1 mutL DNA mismatch repair endonuclease MutL Morganella morganii S4
5 group_2134 NLDBIP_17455 44628 46502 1 htpG molecular chaperone HtpG Morganella morganii S4
6 group_1363 LHKJJB_13135 67300 69198 1 mutL DNA mismatch repair endonuclease MutL Morganella morganii S3
7 group_2134 LHKJJB_17205 9686 11560 -1 htpG molecular chaperone HtpG Morganella morganii S3
8 group_1363 HKOGLL_11895 93245 95143 -1 mutL DNA mismatch repair endonuclease MutL Morganella morganii S5
9 group_2134 HKOGLL_17190 44628 46502 1 htpG molecular chaperone HtpG Morganella morganii S5
10 group_1363 F4V73_RS09665 34794 36692 1 mutL DNA mismatch repair endonuclease MutL Morganella psychrotolerans
11 group_2134 F4V73_RS16290 71170 73047 -1 htpG molecular chaperone HtpG Morganella psychrotolerans
12 group_2134 PMI_RS10770 2370625 2372508 -1 htpG molecular chaperone HtpG Proteus mirabilis HI4320
13 group_1363 PMI_RS16740 3689587 3691596 1 mutL DNA mismatch repair endonuclease MutL Proteus mirabilis HI4320