Orthogroup:group_1419



Homologs in group_1419

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08765 FBDBKF_08765 Morganella morganii S1 yhbQ putative endonuclease, GIY-YIG superfamily
EHELCC_12760 EHELCC_12760 Morganella morganii S2 yhbQ putative endonuclease, GIY-YIG superfamily
NLDBIP_13100 NLDBIP_13100 Morganella morganii S4 yhbQ putative endonuclease, GIY-YIG superfamily
LHKJJB_13455 LHKJJB_13455 Morganella morganii S3 yhbQ putative endonuclease, GIY-YIG superfamily
HKOGLL_11575 HKOGLL_11575 Morganella morganii S5 yhbQ putative endonuclease, GIY-YIG superfamily
F4V73_RS09980 F4V73_RS09980 Morganella psychrotolerans - GIY-YIG nuclease family protein
PMI_RS17170 PMI_RS17170 Proteus mirabilis HI4320 - GIY-YIG nuclease family protein

Distribution of group_1419 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1419 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1419

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1419.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yhbQ 5
2 - 2

Product

# Product Occurence
1 putative endonuclease, GIY-YIG superfamily 5
2 GIY-YIG nuclease family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2827 7 L Replication, recombination and repair (L) Predicted endonuclease, GIY-YIG superfamily

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07461 7 putative endonuclease - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01541 7 GIY-YIG catalytic domain

Annotations of the 141 SwissProt hits

Annotation Number of occurrences
Putative GIY-YIG domain-containing protein 242L 1
UPF0213 protein AHA_3736 1
UPF0213 protein ASA_0550 1
UPF0213 protein BA_0032/GBAA_0032/BAS0034 1
UPF0213 protein BCE33L0031 1
UPF0213 protein BCE_0033 1
UPF0213 protein BH0048 1
UPF0213 protein BLi00048/BL00536 1
UPF0213 protein BPUM_0019 1
UPF0213 protein BT9727_0031 1
UPF0213 protein CKO_04549 1
UPF0213 protein CPE1444 1
UPF0213 protein DP2720 1
UPF0213 protein DVU_3309 1
UPF0213 protein ECA0725 1
UPF0213 protein EF_2693 1
UPF0213 protein ESA_03545 1
UPF0213 protein Ent638_3592 1
UPF0213 protein FN1575 1
UPF0213 protein H16_B0156 1
UPF0213 protein HQ_3675A 1
UPF0213 protein KPN78578_35340 1
UPF0213 protein LACR_2011 1
UPF0213 protein LCA_1266 1
UPF0213 protein LMOf2365_0181 1
UPF0213 protein LSEI_1587 1
UPF0213 protein Lreu_0682 1
UPF0213 protein M28_Spy1146 1
UPF0213 protein M6_Spy1178 1
UPF0213 protein MGAS10270_Spy1222 1
UPF0213 protein MGAS10750_Spy1258 1
UPF0213 protein MGAS2096_Spy1218 1
UPF0213 protein MGAS9429_Spy1198 1
UPF0213 protein MW0443 1
UPF0213 protein NGO1598 1
UPF0213 protein NMA2126 1
UPF0213 protein NMB0361 1
UPF0213 protein NMC1807 1
UPF0213 protein NP_0776A 1
UPF0213 protein OB0043 1
UPF0213 protein ORF82 1
UPF0213 protein PA14_14150 1
UPF0213 protein PA3854 1
UPF0213 protein PC1_0597 1
UPF0213 protein PEPE_0875 1
UPF0213 protein PP_0972 1
UPF0213 protein PSPA7_1257 1
UPF0213 protein RBAM_000440 1
UPF0213 protein Reut_B5558 1
UPF0213 protein SA0446 1
UPF0213 protein SAB0437 1
UPF0213 protein SACOL0530 1
UPF0213 protein SAG0778 1
UPF0213 protein SAHV_0485 1
UPF0213 protein SAK_0903 1
UPF0213 protein SAOUHSC_00458 1
UPF0213 protein SAR0489 1
UPF0213 protein SAS0445 1
UPF0213 protein SAUSA300_0465 1
UPF0213 protein SAV0488 1
UPF0213 protein SERP0126 1
UPF0213 protein SE_2295 1
UPF0213 protein SG0387 1
UPF0213 protein SH2523 1
UPF0213 protein SPD_1364 1
UPF0213 protein SP_1535 1
UPF0213 protein SPs0786 1
UPF0213 protein SPy_1412/M5005_Spy1151 1
UPF0213 protein SSA_0709 1
UPF0213 protein SSP2268 1
UPF0213 protein SYNAS_10430 1
UPF0213 protein Spro_0507 1
UPF0213 protein SpyM3_1077 1
UPF0213 protein SpyM50708 1
UPF0213 protein VC0395_0675/VC395_A0575 1
UPF0213 protein VC_A0739 1
UPF0213 protein VIBHAR_05350 1
UPF0213 protein VNG_2274C 1
UPF0213 protein VPA1222 1
UPF0213 protein XAC3202 1
UPF0213 protein XCC3072 1
UPF0213 protein XC_1086 1
UPF0213 protein XOO1228 1
UPF0213 protein YE0453 1
UPF0213 protein YPA_2977 1
UPF0213 protein YPDSF_3285 1
UPF0213 protein YPK_3712 1
UPF0213 protein YPN_0612 1
UPF0213 protein YPO3475/y0709/YP_0608 1
UPF0213 protein YPTB0498 1
UPF0213 protein YPTS_0528 1
UPF0213 protein YazA 1
UPF0213 protein YhbQ 33
UPF0213 protein YpAngola_A4013 1
UPF0213 protein YpsIP31758_3578 1
UPF0213 protein YsiG 1
UPF0213 protein gbs0798 1
UPF0213 protein in VLF1-GP41 intergenic region 1
UPF0213 protein in glnA 3'region 1
UPF0213 protein in ldhD 5'region 1
UPF0213 protein in potE 3'region 1
UPF0213 protein lin0209 1
UPF0213 protein llmg_2010 1
UPF0213 protein lmo0166 1
UPF0213 protein lp_2058 1
UPF0213 protein lwe0147 1
UPF0213 protein plu4503 1
UPF0213 protein spr1390 1
UPF0213 protein spyM18_1420 1

Protein length

Min length 93
Max length 106
Mean length (sd) 104.1 (4.9)
Median length 106.0

Protein length distribution