PF13583


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13583, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13583
Description Metallo-peptidase family M12B Reprolysin-like

Occurence in the database

PF13583 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_302 FBDBKF_07975 126303 127757 1 Ca2+-binding protein, RTX toxin-related Morganella morganii S1
1 group_302 EHELCC_13805 100497 101951 1 Ca2+-binding protein, RTX toxin-related Morganella morganii S2
2 group_302 NLDBIP_14250 121372 122826 1 Ca2+-binding protein, RTX toxin-related Morganella morganii S4
3 group_302 LHKJJB_08600 36923 38377 -1 Ca2+-binding protein, RTX toxin-related Morganella morganii S3
4 group_302 HKOGLL_08150 36923 38377 -1 Ca2+-binding protein, RTX toxin-related Morganella morganii S5