PF13419


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13419, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 16 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13419
Description Haloacid dehalogenase-like hydrolase

Occurence in the database

PF13419 is associated with 16 different proteins (see tab "Protein list" and "Profile")
The 16 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1599 FBDBKF_10435 42871 43590 1 gph phosphoglycolate phosphatase Morganella morganii S1
1 group_1819 FBDBKF_13475 73066 73731 1 hxpB hexitol phosphatase HxpB Morganella morganii S1
2 group_1819 EHELCC_08620 201460 202125 -1 hxpB hexitol phosphatase HxpB Morganella morganii S2
3 group_1599 EHELCC_14770 42861 43580 1 gph phosphoglycolate phosphatase Morganella morganii S2
4 group_1819 NLDBIP_08945 201460 202125 -1 hxpB hexitol phosphatase HxpB Morganella morganii S4
5 group_1599 NLDBIP_14600 42861 43580 1 gph phosphoglycolate phosphatase Morganella morganii S4
6 group_1819 LHKJJB_05320 55034 55699 1 hxpB hexitol phosphatase HxpB Morganella morganii S3
7 group_1599 LHKJJB_14745 98146 98865 -1 gph phosphoglycolate phosphatase Morganella morganii S3
8 group_1819 HKOGLL_05595 186051 186716 -1 hxpB hexitol phosphatase HxpB Morganella morganii S5
9 group_1599 HKOGLL_13365 98146 98865 -1 gph phosphoglycolate phosphatase Morganella morganii S5
10 group_1819 F4V73_RS03290 702057 702722 -1 hxpB hexitol phosphatase HxpB Morganella psychrotolerans
11 group_1599 F4V73_RS14130 39605 40324 1 phosphoglycolate phosphatase Morganella psychrotolerans
12 group_376 PMI_RS01395 344579 345223 -1 pgmB beta-phosphoglucomutase Proteus mirabilis HI4320
13 group_1819 PMI_RS04960 1086892 1087560 -1 hxpB hexitol phosphatase HxpB Proteus mirabilis HI4320
14 group_376 PMI_RS08670 1895134 1895796 -1 sugar phosphatase Proteus mirabilis HI4320
15 group_1599 PMI_RS14995 3327687 3328397 1 phosphoglycolate phosphatase Proteus mirabilis HI4320